Gene Shewmr4_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2013 
Symbol 
ID4252586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand+ 
Start bp2398019 
End bp2398711 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content51% 
IMG OID638118626 
Producthypothetical protein 
Protein accessionYP_734143 
Protein GI113970350 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00000000381426 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGATTGAAT ATAACGTCAC AGGGGCATTT CTGGTGGGAT TAATGGGCGC AGCCCACTGC 
TTTGGTATGT GTGGCGGCCT CGTTGGCGCC TTTTCCTCCC AACTGCCGAA TCCTAAACAG 
GGTAATCACT TAGCCCATCA ACTCACCTAC TTATTAAGCT ATAACCTCGG CCGGATTTTA 
AGTTATACCC TCGCAGGTGC CTTAGTCGGC GGTTCGTCGG CCATGCTTGG GCACTTATTC 
GAACTCGACA GTTACCTGTT AATCCTAAGG ATCATTGCTG GCGTGATGAT GATTGCAACA 
GGGCTTTACA TTGCAAAAAT CTGGGTGGGT ATAGTGCAGA TTGAGCGCCT TGGCCAAGTG 
TTATGGCGCT ACCTTAAACC TTTAGCCCAA CGCCTCGTGC CCATCACTAC GCCCATGCAG 
GCCATCACCG CTGGACTCAT TTGGGGCTGG CTACCCTGCG GCTTGGTCTA TAGCACCTTA 
ACCTGGTCGG TGGCGGCAGG CTCTGCCAGC CAAGGCGCCT TGATTATGTT CGCCTTTGGA 
TTAGGGACAC TGCCAGCGTT ACTGAGTGCC GGAGTGGCGG CCAAACGTTT AGCCAATTGG 
GTACAGCAAA AAACCGTTAG ATTATTGAGT GGCTTACTTT TAATTGCCTT TGGCGCACAA 
ACTTTATATA TCGCCCTGTC GCAGCTAAAC TAG
 
Protein sequence
MIEYNVTGAF LVGLMGAAHC FGMCGGLVGA FSSQLPNPKQ GNHLAHQLTY LLSYNLGRIL 
SYTLAGALVG GSSAMLGHLF ELDSYLLILR IIAGVMMIAT GLYIAKIWVG IVQIERLGQV 
LWRYLKPLAQ RLVPITTPMQ AITAGLIWGW LPCGLVYSTL TWSVAAGSAS QGALIMFAFG 
LGTLPALLSA GVAAKRLANW VQQKTVRLLS GLLLIAFGAQ TLYIALSQLN