| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1991 |
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| Symbol | |
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| ID | 4252564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2367618 |
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| End bp | 2368619 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118604 |
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| Product | Alpha-N-arabinofuranosidase |
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| Protein accession | YP_734121 |
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| Protein GI | 113970328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.535361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0025818 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAAGAG CAACAAACAG CCCCCTAGTC GAGCAGCGCG CCGATCCCTT TGTGTACCTA
CATAGCGACG GTTATTACTA CTTTACGGGC TCTGTTCCGA CCTACGATCG GATTGAACTG
CGTAAATCCA AGACCTTAGA CGGCTTAAAA GACGCACAAA CCTTCGATAT CTGGTTTAAA
CACCAAAGCG GCCCAATGAG CCGCCACGTA TGGGCGCCCG AGATCCATTA TCTCGACGGC
AAATGGTATA TCTACTTTGC GGCAAGTGAA GAGGAAAATA TTTGGGCCTT ACGCCCCTAT
GTGCTTGAGT GTCTAGGACA AGATCCATTA AATGATGAAT GGATTGAACT TGGCATGATG
CAGGCGGCTG AGGGTGATAA TAAGTCCTTT ATCGACTTTT CCTTAGATGC GACCATTTTC
GAAAACAACG GTAAGCGTTA CTTCTGCTGG GCGGAGAAAA CCGGTGGACA ATTTGCGGCA
TCCAACCTGT ATCTTGCGGA AATGGCATCG CCCATCAAGT TAAAGACGGC GCAATTTATG
CTCACCACCC CAGATTATGA TTGGGAGCGC GTCGATTTTT GGGTTAACGA AGGGCCTGCA
GTACTTAAAC ACCAAGGTAA AATCTTCATT ACTTTCTCAG CCAGCGCCAC AGGTGCTTGT
TATTGCATGG GTTATATGGA GGCCGATGAG CATGCTGATC TGCTCGATCG TAACTCATGG
AAGAAAACCC GCCAGCCAGT GCTGTGCACA GATGTCGACA AGCAAATATT CGGCCCTGGT
CATAACAGTT TCACCGTGGC AGAAGATGGC GTGACGCCCA TCTGTGTTTA CCATGCCCGT
GATTATGAAC ATGCGGTGGG CGATCCTAGC GTGGTGCCAA AGACAGATAC CCGTCCATTA
GCGCAAATCA TTAAAGATCC ACTCTATGAT CCCAATCGCC ATGCGCGGAC GTTAGCGGTG
TCATTTGATG AGAGCGGGCG CCCCTTGTTC AACCTCTACT AA
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| Protein sequence | MIRATNSPLV EQRADPFVYL HSDGYYYFTG SVPTYDRIEL RKSKTLDGLK DAQTFDIWFK
HQSGPMSRHV WAPEIHYLDG KWYIYFAASE EENIWALRPY VLECLGQDPL NDEWIELGMM
QAAEGDNKSF IDFSLDATIF ENNGKRYFCW AEKTGGQFAA SNLYLAEMAS PIKLKTAQFM
LTTPDYDWER VDFWVNEGPA VLKHQGKIFI TFSASATGAC YCMGYMEADE HADLLDRNSW
KKTRQPVLCT DVDKQIFGPG HNSFTVAEDG VTPICVYHAR DYEHAVGDPS VVPKTDTRPL
AQIIKDPLYD PNRHARTLAV SFDESGRPLF NLY
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