| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1924 |
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| Symbol | rpsA |
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| ID | 4252498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2294862 |
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| End bp | 2296529 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638118535 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_734055 |
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| Protein GI | 113970262 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000191049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000752303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTC AAACTCTGGA ATTCCGTCCA
GGCTCTATCG TTCGTGGTAC TGTAGTTGCT ATCGAAAACG GTATGGTTCT GGTTGATGCC
GGTCTGAAGT CTGAAAGCCC AATCCCAGCT GAACAATTCA AAAACGCTCA AGGCGTTTTA
GAAATCGCTG TTGGTGATGA AGTTGACGTA GCTCTTGACT CTGTTGAAGA CGGCTTCGGT
GAGACTCAAC TGTCTCGCGA AAAAGCGAAA CGTCACGAAG CTTGGATCGT TCTGGAAAAA
GCTTACGAAG ATGCTGAAAC TGTAATCGGT ATCATCAATG GTAAAGTGAA AGGCGGTTTC
ACTGTTGAAT TAAACGGTAT CCGTGCCTTC TTACCAGGTT CTCTAGTTGA CGTGCGCCCA
GTTCGCGACA CCGCTCACTT AGAGTACAAA GAATTAGAAT TCAAAGTTAT CAAACTAGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCAGA AAGCAGCGCA
GAGCGTGATG CACTGTTAGA AAACCTGCAA GAAGGTCAAG CAGTTAAAGG TATCGTTAAG
AACCTGACTG ACTACGGTGC ATTCGTAGAT TTAGGTGGTG TTGACGGTCT GTTACATATC
ACTGATATGG CATGGAAACG CGTTAAGCAC CCATCTGAAA TCGTAAACGT TGGTGACGAA
ATCAACGTTA AAGTTCTGAA GTACGATCGT GAGCGCACTC GTGTGTCTTT AGGTCTGAAA
CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAGCGCT ACCCAGAAAA CACTAAGTTA
ACTGGTCGCG TAACTAACCT GACTGACTAC GGCTGTTTCG TTGAAATCGA AGAAGGCGTT
GAAGGCTTAG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATTCA CCCATCTAAA
GTGGTTAACT TAGGTGATGA AGTTGAAGTT CTGGTTCTGG ACATCGATGA AGAGCGTCGT
CGTATTTCTC TAGGTCTGAA GCAATGTAAG ACCAACCCAT GGGATGACTT CGCAACTCGT
TACAACAAAG GCGACAAGGT TTCTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTC
ATCGGTCTTG ACGGCGGTAT CGATGGTTTA GTTCACCTGT CTGACATTTC TTGGAACGGT
ACTGGCGAAG ACGCAGTATC TGAGTACAAG AAAGGCGACG AAATCCACGC AGTGGTTCTG
TCTGTTGACC CAGAGCGCGA GCGCATCAGC TTAGGCGTTA AGCAAACTGA AGACGATCCA
TTCAACGCTT ACTTAGCTGA CAAGAAGAAA GGTACTATCG TAAACGGTAC TGTTTCTGCT
GTTGATGCTA AAGGTGTGAC TGTTGAACTA GCTGACACTG TTGAAGGTTA CATCCGTGTA
GCTGACATCA GCCGTGAGCG CATCGAAGAT GCATCTACTG TTTACTCAGT AGGTGACGCT
ATCGAAGCTA AGTTCATGGG TGTTGACCGT AAGAACCGTT CTATCAGCCT GTCAATCAAA
GCGAAAGACG AAGCTGAAGA AAAAGAAGTA ATGGCGACCT TGAATAAACA AGAAGACGCT
GTTATTAGTA ATGCAATGGC TGAAGCGTTT AAAGCAGCTC GCAAATAA
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| Protein sequence | MTESFADLFE QSLQTLEFRP GSIVRGTVVA IENGMVLVDA GLKSESPIPA EQFKNAQGVL
EIAVGDEVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTAHLEYK ELEFKVIKLD QKRNNVVVSR RAVIESESSA
ERDALLENLQ EGQAVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPENTKL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK TNPWDDFATR
YNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEDAVSEYK KGDEIHAVVL
SVDPERERIS LGVKQTEDDP FNAYLADKKK GTIVNGTVSA VDAKGVTVEL ADTVEGYIRV
ADISRERIED ASTVYSVGDA IEAKFMGVDR KNRSISLSIK AKDEAEEKEV MATLNKQEDA
VISNAMAEAF KAARK
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