| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1853 |
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| Symbol | |
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| ID | 4252427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2201380 |
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| End bp | 2202567 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118464 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_733984 |
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| Protein GI | 113970191 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000312103 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000138653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCCGGTT TTGAATTATT TGGTCCAGAA GAAAAGCAAG AAGTCGCCGA TGTGATGGAG
CACGGCTTTA CCTTCCGTTA TAACTTCGAC CATATGCGTA ATGATCGCTG GAAGACTCGC
GATATGGAGC AACTGCTCTG CGAGAAAATG AATGTTAAGC ATGCTCACCT CTTATCTAGC
GGTACTGCTG CGCTGCAAAC AGCCTTAATG GCGGCAGGCA TTGGTGCTGG CGACGAAGTT
ATCGTGCCAC CTTTTACCTT TGTTGCTTCT GTAGAAGCGA TTTTCATGGC CGGTGCTGTG
CCAATTTTTG CCGAAATCGA CGAGACACTG TGTCTATCAC CAGAAGGCAT TGAAGCGGCG
ATCACCCCAC GTACTAAAGC GGTGAACTTA GTACACATGT GTGGCTCTAT GGCCAAGATG
GACGAAATCA AAGCCGTTTG CGCTAAGCAC AACATCGTAT TGTTAGAAGA TGCTTGCCAA
GCCATTGGCG GCAGCTACAA GGGCCAAGCC CTAGGTACTA TCGGTGATGT AGGTTGTTAC
TCTTTCGATT CTGTTAAAAC CATCACCTGT GGTGAAGGCG GCGCGGTGAT CACCAATAAC
ACTGAAATCT ACGATCACGC CCACATGTTC TCCGATCACG GCCATGACCA TATTGGTAAA
GACCGTGGCG CCGAGTCACA CCCGATTATG GGTCTGAACT TCCGTATCTC TGAAATGAAT
GCGGCCTTAG GTTTAGCCCA GTTACGTAAA CTCGATACCA TTATCGACAT TCAACGTAAA
AACAAAAAAG TCATTAAAGA AGCCATGGCG AGCATTCCTG AAGTCAGCTT CCGCGAAATC
CCCGATCCAG AGGGTGATTC AGCTGGCTTC TTAAGCTTTA TGTTACCAAC AGAAGCACGT
ACCCAAGAGA TCAGCAAAAA ACTGGCTGAG AATGGCGTTG ATGGTTGCTT CTACTGGTAC
GTGAACAACT GGCATTATCT GAAAAACTGG AAACACATTC AGGAGCTTAA GACCCCTGCT
GCGTTGCCAA TCACATTAAT CGCCGACAGA CCTGACTATA CTCAAATTTC TGTGCCGAAA
TCTGATGCCA TTATGAGCCG CACTATTTCC ATGCTCATTA AATTGTCTTG GACCGATGCT
CAGATTGCCG AGCGTATTGA AAACATTAAG AAAGCATTTG CCCAATAA
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| Protein sequence | MPGFELFGPE EKQEVADVME HGFTFRYNFD HMRNDRWKTR DMEQLLCEKM NVKHAHLLSS
GTAALQTALM AAGIGAGDEV IVPPFTFVAS VEAIFMAGAV PIFAEIDETL CLSPEGIEAA
ITPRTKAVNL VHMCGSMAKM DEIKAVCAKH NIVLLEDACQ AIGGSYKGQA LGTIGDVGCY
SFDSVKTITC GEGGAVITNN TEIYDHAHMF SDHGHDHIGK DRGAESHPIM GLNFRISEMN
AALGLAQLRK LDTIIDIQRK NKKVIKEAMA SIPEVSFREI PDPEGDSAGF LSFMLPTEAR
TQEISKKLAE NGVDGCFYWY VNNWHYLKNW KHIQELKTPA ALPITLIADR PDYTQISVPK
SDAIMSRTIS MLIKLSWTDA QIAERIENIK KAFAQ
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