| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1424 |
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| Symbol | |
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| ID | 4252002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1662835 |
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| End bp | 1663851 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638118023 |
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| Product | aspartate semialdehyde dehydrogenase |
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| Protein accession | YP_733559 |
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| Protein GI | 113969766 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000300384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGG AATTTAATGT TGTCGTTTTA GGTGCATCGG GCGCAGTGGG TCAAACTATG
ATTGAGATCC TCGAAGAGCG TAACTTCCCG GTAGCGAACT TATACCCTTT AGCCAGTAGC
CGTAGCGCCG GTGAAACGGT CAGCTTCCAT GGCAAACAAG TTACCATTTT GGACGTCGAA
ACCTTCGATT GGAGTCAAGC ACAAATAGGC TTTTTCTCTG CCGGTGGCGA TGTGTCGGCC
AAGTGGGCGC CTATTGCCGC TGAAGCGGGT TGTGTGGTGA TCGATAACAC TTCGCACTTC
CGCTACGACA TTGATATTCC ATTGGTTGTG CCTGAGGTTA ACCCCCATGC TATTGCCGAT
TTCCGCAACC GTAACATCAT CGCCAACCCG AACTGCTCGA CCATCCAAAT GCTGGTGGCA
CTAAAACCGA TTTACGACAC TTACGGTATC AGCCGTATTA ACGTTGCGAC CTACCAGTCT
GTCTCTGGTA CAGGTAAAAA GGCGATTGAA GAGCTGGCAA AACAATGCAC TAAGTTGCTG
CAAGGTCTGC CTGCTGACGC TGAAGTTTAT CCAAAGCAAA TCGCGTTTAA CGTATTGCCG
CAAATCGATA AATTTATGGA TAACGGCTAC ACCAAAGAAG AAATGAAAAT GGTCTGGGAA
ACCCAGAAGA TTTTCGGTGA TGACGAAATC CTCGTCAACG CAACGGCCGT GCGTGTGCCT
GTCTTCTATG GCCACTCAGA AGCCGTACAT ATCGAGACGC GTCAACCTGC TGATGCAGAA
GATATTAAAG CTTTGCTGCG CGATGCCGAA GGAGTGGTAT TGTTCGAATC CGATGACGAA
TATCCAACGG CAGTGACCCA TGCAGCGGGT ACCGATCCAG TCTATGTGGG CCGTGTGCGT
AAGGATATCT CCCATTCTCA CGGTATTAAC CTTTGGGTGG TGTCGGACAA TATTCGTAAA
GGCGCAGCCT TAAACAGTGT GCAAATTGCT GAGATTTTAG TGAGAGATTA TTACTAA
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| Protein sequence | MSQEFNVVVL GASGAVGQTM IEILEERNFP VANLYPLASS RSAGETVSFH GKQVTILDVE
TFDWSQAQIG FFSAGGDVSA KWAPIAAEAG CVVIDNTSHF RYDIDIPLVV PEVNPHAIAD
FRNRNIIANP NCSTIQMLVA LKPIYDTYGI SRINVATYQS VSGTGKKAIE ELAKQCTKLL
QGLPADAEVY PKQIAFNVLP QIDKFMDNGY TKEEMKMVWE TQKIFGDDEI LVNATAVRVP
VFYGHSEAVH IETRQPADAE DIKALLRDAE GVVLFESDDE YPTAVTHAAG TDPVYVGRVR
KDISHSHGIN LWVVSDNIRK GAALNSVQIA EILVRDYY
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