| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1328 |
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| Symbol | |
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| ID | 4251348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1538822 |
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| End bp | 1540240 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638117913 |
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| Product | mannose-1-phosphate guanylyltransferase (GDP) |
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| Protein accession | YP_733464 |
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| Protein GI | 113969671 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
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| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.358027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000505656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAATA TTTTACCTGT TATTATGGCA GGAGGCTCCG GCACTCGTTT ATGGCCGCTT
TCACGTGGCA ATTTTCCTAA ACAGTTTTTA TCGCTTTCTG GCAACGCCAC TATGCTGCAA
AACACCATCA GCCGCTTAAA TGGTATTGAG CATGCACCTG CGATGTTGAT TTGTAATGAA
GAGCATCGCT TTATCGCGGC AGAGCAGGTA AGGCTGTTAG GTGTTAAACA TAACGGTATT
TTGTTAGAGC CTGTTGGCCG TAATACCGCG CCTGCAATTG CTTTAGCGGC CTTTAAAGCG
GTTGAGTTAG GACAAGACCC CTTATTATTG GTGTTAGCGG CTGACCATGT GATAGAAGAT
GTTGCTGCAT TTCAACAGTC GGTTAGCAAG GCCGCTGAGT TAGCTGCTAC GGGTAAGCTA
GTCACTTTTG GTATTGTGGG TGATAAACCT GAAACGGGTT ACGGTTATAT TAAGCGTGGC
GATGCTTGTC AGCATGGTTA TGTTGTTGAT TGCTTTGTTG AAAAACCTAA CTTAGCCACT
GCTGAAGTGT ATGTCTCAAG CGGTGATTAT TACTGGAATA GTGGCATGTT TTTGTTTAAA
GCCAGCCGTT ATCTTGACGA ATTAAGAGTT TATCGCCCCG ATATCTACGC TGCCTGTGAG
CTTGCTATGC AAGTGCAAAA TAATGACAGC GATTTTATTC GCATTGATAA AGCTGCCTTT
GAAGCTTGCC CAGATGATTC TATCGACTAT GCGGTGATGG AGCAGACTAA AGATGCTGTG
GTAGTGCCAA TGGATGCAGG TTGGAGCGAT GTAGGCGGTT TTGCGGCTTT ATGGGAAGTC
TCAGGTAAAG ATGCCGATGG TAATGTGTTC AATGGCGATG TTAAAGCTGT TGATACTAAA
AACACTTTAG TATTTGGTGG CAATAAACTT ATCACCACTG TGGGTGTTGA GGACTTGGTA
ATTGTTAATA CTAAGGATGC GGTATTAGTT GCCCATAAAG ATCAATCACA ACATGTAAAA
GCGATTGTCG GCCAGCTTAA AGCGGAGCAG CGTAGCGAGG TGACTTTCCA TCGTGAGGTA
TATCGCCCCT GGGGTAAGTA TGACTCTATC GATAATGGCG ATCGTTTTCA GGTTAAGCGT
ATTACCGTAA AACCAGGCGC TAAGTTATCG GTACAAATGC ACCATCACCG TGCGGAGCAT
TGGATTGTTG TTTCTGGTAC GGCGAAAGTG ACTAACGGTG ATAAGGATAT TCTGTTAACA
GAAAATCAAT CAACTTATAT ACCTGTAGGT GTCATTCATG CGCTAGAAAA TCCAGGTAAA
GTTGATCTTG AGCTGATTGA AGTGCAATCC GGTTCGTACC TCGGTGAAGA TGATATTGTT
CGTTTTGAAG ATAGATACGG ACGAGTAGAA GGGAAGTAG
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| Protein sequence | MKNILPVIMA GGSGTRLWPL SRGNFPKQFL SLSGNATMLQ NTISRLNGIE HAPAMLICNE
EHRFIAAEQV RLLGVKHNGI LLEPVGRNTA PAIALAAFKA VELGQDPLLL VLAADHVIED
VAAFQQSVSK AAELAATGKL VTFGIVGDKP ETGYGYIKRG DACQHGYVVD CFVEKPNLAT
AEVYVSSGDY YWNSGMFLFK ASRYLDELRV YRPDIYAACE LAMQVQNNDS DFIRIDKAAF
EACPDDSIDY AVMEQTKDAV VVPMDAGWSD VGGFAALWEV SGKDADGNVF NGDVKAVDTK
NTLVFGGNKL ITTVGVEDLV IVNTKDAVLV AHKDQSQHVK AIVGQLKAEQ RSEVTFHREV
YRPWGKYDSI DNGDRFQVKR ITVKPGAKLS VQMHHHRAEH WIVVSGTAKV TNGDKDILLT
ENQSTYIPVG VIHALENPGK VDLELIEVQS GSYLGEDDIV RFEDRYGRVE GK
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