| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1133 |
|---|
| Symbol | |
|---|
| ID | 4251801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1334007 |
|---|
| End bp | 1334696 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638117714 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_733270 |
|---|
| Protein GI | 113969477 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3658] Cytochrome b |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000490304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCG AACATATCAA AGTTAAAGTC TGGGATTTAC CCACACGCTT TTTTCACTGG
GGCATGGTGG CCCTCATGGC CTTACTCTGG TGGAGCGCCG AAGTGGGTGA AATGCAATGG
CACCAGATCT TTGCTTATAG TTTGTTGATC TTGATTGGCT TTCGGCTTTT ATGGGGCTTG
ATTGGCAGTG ATACTGCGAG GTTTAGTCAC TTCGTGCATC ATCCCAAGGT GGTGTTTGAG
TATTTGAAAG ACGTTCGCGC AAAGGGCGTG TCAGTGGTTT TAGGGCATAA TCCGATGGGC
GGTTATATGG TGATTGTGTT GATTGCCATT ATCAGCTTAC AGCTAATCAC TGGACTCTTT
GCTACCGATG ATGTGTTTAC CGAAGGTCCA CTGTACAGCT ATGTGAGTGC TGATACAGCT
TCGTTTCTCA CTTGGTTGCA TAAGATGAAT TTCAACCTAA TCTTAGCCTT GAGTGCCGTG
CATGTGTTGG CTGTCGTTGT ACACGCGCTT AAAGGTGACA AGTTAGTGGG AGCCATGCTC
AGCGGTTACA AACGGGTGTC TAAAGTAGAG CACGCCAAAT CTGAGACTCA GTTGGTGTTT
AAATCACAGT GGTTGGCTTT AATTGTGCTG TTAATCATCG CTGGAGTGGT GTTTACCTAT
TTGATGTGGC CCATAGTACA AGTGCTCTAG
|
|---|
| Protein sequence | METEHIKVKV WDLPTRFFHW GMVALMALLW WSAEVGEMQW HQIFAYSLLI LIGFRLLWGL
IGSDTARFSH FVHHPKVVFE YLKDVRAKGV SVVLGHNPMG GYMVIVLIAI ISLQLITGLF
ATDDVFTEGP LYSYVSADTA SFLTWLHKMN FNLILALSAV HVLAVVVHAL KGDKLVGAML
SGYKRVSKVE HAKSETQLVF KSQWLALIVL LIIAGVVFTY LMWPIVQVL
|
|---|
| |