| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0913 |
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| Symbol | |
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| ID | 4251844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1064049 |
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| End bp | 1065002 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117476 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_733050 |
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| Protein GI | 113969257 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.675268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG TCGTACTCGA TGGTGAAACC TTAAACCCTG GGGATTTAAC TTGGCAAGCG
GTCAGCGCAT TAGGGGAATT TAGCTGTTTT GCCCGCACGC CCTCGGCGGA GATTATCCCG
CGCGCTCAGG ATGCCGAGAT AGTGCTCACC AACAAGACGC CCTTCGATGC CAACACCTTA
GCCCAACTGC CTAAGCTTAA ATATATCGGC GTGCTTGCCA CGGGCACCAA CGTGGTGGAT
CTTGCCGCCG CAAAAGAGTT AGGCATAGTG GTCACCAACG TGCCCGCCTA TGGCCCCGAT
GCCGTCGCGC AAATGGTGTT TGCCCATATA TTGCATCATA CGCAAGCCGT TGCCGCGCAC
CATCAAGCCG TTGCCGCAGG GCAATGGAGC AATTGCAGTG ACTTTTGTTT TACCTTAATG
CCGCTGCAAT CCCTTAAAGG CAAAACCTTA GGCTTGATTG GTTATGGGGA TATTGGCCAG
CAGGTGGCTA AACTCGCCTT AGCCTTTGGC ATGAAGGTAT TAGTGAATAC CCGCACCGAA
CCTAGCGATT TACCCCTAGG CGTGAGTTGG ACATCCCGCG ATACGGTATT TAAGGAGTCC
GATATTCTCT CGCTCCACTG CCCACTCACC CTTGAGACCA CCGAGCTGAT TAATGCCCAA
ACCCTCGAAT TAATGAAGCC GCAGGCGTTA CTGATCAACA CCGCGCGCGG CGGCTTAATC
GATGAGGCCG CGCTTGCGGC CGCATTAACG CAGGGCAAAG TCTTTGCTGG CGTCGATGTA
CTCTCGACCG AACCACCGAG TGCAGATAAT CCGCTACTAA CAGCGCCCAA TATCAGTATC
AGCCCCCACA ATGCTTGGGC GACCAAAGAA GCGCGGCAGA ACCTACTCAA TATCGCGACG
GCAAATCTCA GCGCTTATTT AGCTGGCGAT AGAGTGAATT GGGTGAATCC CTAA
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| Protein sequence | MKIVVLDGET LNPGDLTWQA VSALGEFSCF ARTPSAEIIP RAQDAEIVLT NKTPFDANTL
AQLPKLKYIG VLATGTNVVD LAAAKELGIV VTNVPAYGPD AVAQMVFAHI LHHTQAVAAH
HQAVAAGQWS NCSDFCFTLM PLQSLKGKTL GLIGYGDIGQ QVAKLALAFG MKVLVNTRTE
PSDLPLGVSW TSRDTVFKES DILSLHCPLT LETTELINAQ TLELMKPQAL LINTARGGLI
DEAALAAALT QGKVFAGVDV LSTEPPSADN PLLTAPNISI SPHNAWATKE ARQNLLNIAT
ANLSAYLAGD RVNWVNP
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