| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0819 |
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| Symbol | |
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| ID | 4250751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 953944 |
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| End bp | 954660 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117382 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_732956 |
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| Protein GI | 113969163 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.309816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000041871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACAAGCG CGCCAATGCC TGAACCCCTA TCGCAAATCC TATTGATTGA AGACGACCTC
CCCCTTGCCG AACTGGTCTG CACCTATTTA ACCCAAGAAG GCTATAAGCT TATCCATTTG
GATAATGCTG AAGATGCGCT CATTCGTCAG GATACCGATG ATTTTGACCT CATCATTTGC
GATGTCATGC TCCCAGGGCA GGATGGTTTT AGTATCTACC CGCAGCTTGC GGCCAGTTAT
CCCTGTCCAA TAATCTTCCT GACGGCGCTC GATAATCATG CCGACCAAAT TCGCGGATTA
AATCTAGGGG CCTGCGATTA CTTACTCAAA CCCGTTGTCC CTCCCCTGCT GTTGGCGCGG
ATTAAGGCCA ACCTGCGCAA ACAGCAATCC AGCAGCAGTC GCAGTAAGCT TAAGTTACAC
GACTTATTTT TAGACCCCAA CCTACAGCAG GTTAATCTTG GGGATGAAGC CTTATCCTTC
ACCACCAAAG AATTTTCACT GCTGTGGATC TTCGCCCTCC ATGCTGGCAA AGTGCTGTCG
CGGGAGTTTT TATTCGAACA ACTCGTCGGC CGCGAATATG ACGGTTTAGA CAGGGCTATA
GACTTAAAAA TCAGCCGACT ACGTAAACGC TTAGATGAGC TGAATGTACC GGGGTTAGCC
ATTACGACTA TTCACGGCAA AGGCTATTTA TTCAATTACT TACCTAAAAA AGGTTAG
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| Protein sequence | MTSAPMPEPL SQILLIEDDL PLAELVCTYL TQEGYKLIHL DNAEDALIRQ DTDDFDLIIC
DVMLPGQDGF SIYPQLAASY PCPIIFLTAL DNHADQIRGL NLGACDYLLK PVVPPLLLAR
IKANLRKQQS SSSRSKLKLH DLFLDPNLQQ VNLGDEALSF TTKEFSLLWI FALHAGKVLS
REFLFEQLVG REYDGLDRAI DLKISRLRKR LDELNVPGLA ITTIHGKGYL FNYLPKKG
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