| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0125 |
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| Symbol | |
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| ID | 4250618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 139356 |
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| End bp | 142166 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638116668 |
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| Product | peptidase M6, immune inhibitor A |
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| Protein accession | YP_732263 |
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| Protein GI | 113968470 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000337002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000228409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGAAGTT CAAAAAGTAT CACAGCGTTA GGATTGATGT TGGCCTTGCT GAGTGGCGCA
AGTATTGCGG CGCCCAATCA TACGCCAGCG GATGCGGGTG TCATTAATAA AGAAAGGATC
CTTTATTGGT TGATCAAGCG GGGTGAAGTC TCCGCCGATG CTAGCGACAG CGTTAAGCAA
GCGGCCGTTG AAGCCTATAT TGCCCGTGCC AGTCTAGCTC AGCCCAAAGA GCCGAGAATG
GTGATTGAGG CCGAACATGA CAGACTGCAG AAAGTAAAAT CGACAGCGAT GATGCGCGCA
CCCGCACAGC GGGTGTTAGG GGATGCAGAC GTGACCAAAA CGGTGAAAGT ATTAACCGTA
CTGATTGATT TTCCTGATTT AAAGTATAAC AACAATGGTT TGACGGCGAG TGATACCGAC
ATGTATTACT CAAGTTACCC CGCGTCTCAC TACAAGAATT TACTCTTCTC CACCACTGGC
TTTACGGGCC CGCAAGGTCA GACCTTAGAC TCCGCCTATC AATATTACCA AGCCGTTTCA
GGCAAGACTT TCTTCTTTAC TGGCGACGTG AAAGGTTGGT ACACAGCAAG CCAAAATGCC
GATTACTATG GCGCCAATAA TGCTGGTAGG GGGAGTGATG CTAATGTGAC TGAGCTGGTT
AAAGAGGCCG TTAGCCAAGC GGTTGCCAAT ATGTCGGCGG CGGAACTCGC AACCTATGAT
ATTGAAGATC CATACGATTT AAATAATAAC GGCAATTTAG ATGAACCCGA TGGCATTATT
GACCATGTGA TGATTTTCCA CTCCAGTATT GGTGAAGAAA CTGGCGGCGG TAAATTAGGG
GACAACGCGA TTTGGTCGCA CCGTTATTAT GTTGACCAGA GCACGCAAGG TTATAGCCTA
CCTGGGTCGA CCAAAAAACT CTTCGGTTAC ACCATTCAAC CAATCGATGC GGCGACAGGG
GTCTGTACCC ATGAGTTTGG CCACGATCTG GGCTTGCCCG ATGAATATGA CACGACGGAG
AACACCAATA AAGATGGTTC TCCCGTGGGT GCTTGGTCTT TAATGTCTTC GGGTAGTTGG
ACTGGCGCCA TCCCTGGTAC TAAACCTAGC GGTTTTAGCC CCTACGCGCG CTCCTATTTA
CAGGAAAAAT ATAAAGGTAA ATGGCTGAAT GAGCGTGAAA TCAGCTTAGA CAGTATTCCT
AAATCTGGTA TGGAAGTGAC ACTGAATCAG GCGTCAAATC AAGAAGTAGT GAACCAGGTA
TCGATTCAGC TTCCTGCGAC ACAAATTGCC TTTAAAACAC CTTATGAAGG GAGCTATCAG
TATTACTCCG GCCAAGGAAA CATGCTGAGC AATAGCATGA GCTTTACGGC AAACTTACCG
GCGACGAGTG AAAAACTCAC GCTTGCGATG CAGGCGAGTT GGGAGGTTGA AGCCGACTAC
GACTATATGC AGGTCAAAGT GAACGGTGTG GCGATTGCGG GCAATTACAC TAAGTCCGTC
AACGCGATTA ACAGCGCTCG ACATATTATT ACGGGTAAAT CATCGAGCAT TTCGGCAGCG
GTCGGCAGCG ACGCTTGGGT GGGGTTGGAA TATGATCTGT CAGCCTACGC TGGCAAAGCT
GTGACGATTG AATTTACCTA TGTGACCGAT GAGGGGGTGA GCGAATCAGG TATCACTATC
GACAATATCA GTATCAAACA AGGTGCAGCT GAGCTGTATG CCGATAATGC TGAGGTTGCG
GGTCAAGCGA CTCTGGCTGG TTACAGTCGG ATCACCAATA CGCGCCCAGG TGCAGCATCC
CGCTACTTAA TCCAATTACG TAGTCACAAT GGTGTCGATG CCGGATTAAA GAATGAAGGT
TTTGATCCCG GCGTACTCCT GTGGTTAGAG GATTTTAGTT ATTACGATAA CAATGTGTCT
GATCATCCCG GCCGAAGCTT AATAGGCGTG ATTGATGCGG ATCAGAACAT GATTGGCAAC
AACTCGACCG ATGTACAAAT CCGCGATGCG GCCTTCAGCC TAGTCAGACA AACGGCTTAT
ACTGGCGACA CTAACCTCGA ACCTACGAGT CTGTTTGACG ATAGTTTCGA TTACAGTGCA
CCGCTCCAAC CACAGTCGGG GATGGTGCTG CAAAAGCTGG GCTTGACGAT GCAAGTGGTC
TCTCAAGCCA GTGACAACAG CACCGCGGTG ATCCGTTTAG CCAATGCGAA TGCCGATCCC
GCATTAACGC CCTTAACGGC AGCGATCAAT CTAAGCCAAA ATGGCTTAAC AGCCTCTGTT
ACTGCAGTGG TTGATGGTGG CGAAGGCGCA TACACTTATG CTTGGGATTT TGGTGTTGCG
GGAGCGACCA GCACTTCAGC GTCGGCGACT TATACCTACG CGAACGCAGG AACCTATACG
CTGACCTTAA CGGTAACCGA TGCCAAAGGC ACAATTGCTA CTGCCACTAA AACGCTTGTG
ATGAGCTTGC CCTTAACCGC TGGTTTTAGT GCCAGTGCCA ACCAGCTTAC GGTGAACTTT
AGCAATACCT CGGCAGGTGG TGTTGGTAGC CGCAGCTATA CATGGAACTT TGGCGATGGC
ACCTCAAGCA CCTCGGTATC GCCATCCCAT ACTTATACTC GCGCGGGCAC TTACCTTGTC
ACACTGACAG TGAAAGATAC CCAAAACGCT ACAGCAAGCA GCAGCTCAAG CGTTACCGTG
TCTGAGCCAA CGACACCGGG TGAAACCCCA AGTAGTGGCG GTGGTGGCAG TCTAAGCTGG
CTGAGCCTGA TGTTGCTCGG TGGTTTTGCG TGGCGCCGCC AGCGTCAATA A
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| Protein sequence | MRSSKSITAL GLMLALLSGA SIAAPNHTPA DAGVINKERI LYWLIKRGEV SADASDSVKQ
AAVEAYIARA SLAQPKEPRM VIEAEHDRLQ KVKSTAMMRA PAQRVLGDAD VTKTVKVLTV
LIDFPDLKYN NNGLTASDTD MYYSSYPASH YKNLLFSTTG FTGPQGQTLD SAYQYYQAVS
GKTFFFTGDV KGWYTASQNA DYYGANNAGR GSDANVTELV KEAVSQAVAN MSAAELATYD
IEDPYDLNNN GNLDEPDGII DHVMIFHSSI GEETGGGKLG DNAIWSHRYY VDQSTQGYSL
PGSTKKLFGY TIQPIDAATG VCTHEFGHDL GLPDEYDTTE NTNKDGSPVG AWSLMSSGSW
TGAIPGTKPS GFSPYARSYL QEKYKGKWLN EREISLDSIP KSGMEVTLNQ ASNQEVVNQV
SIQLPATQIA FKTPYEGSYQ YYSGQGNMLS NSMSFTANLP ATSEKLTLAM QASWEVEADY
DYMQVKVNGV AIAGNYTKSV NAINSARHII TGKSSSISAA VGSDAWVGLE YDLSAYAGKA
VTIEFTYVTD EGVSESGITI DNISIKQGAA ELYADNAEVA GQATLAGYSR ITNTRPGAAS
RYLIQLRSHN GVDAGLKNEG FDPGVLLWLE DFSYYDNNVS DHPGRSLIGV IDADQNMIGN
NSTDVQIRDA AFSLVRQTAY TGDTNLEPTS LFDDSFDYSA PLQPQSGMVL QKLGLTMQVV
SQASDNSTAV IRLANANADP ALTPLTAAIN LSQNGLTASV TAVVDGGEGA YTYAWDFGVA
GATSTSASAT YTYANAGTYT LTLTVTDAKG TIATATKTLV MSLPLTAGFS ASANQLTVNF
SNTSAGGVGS RSYTWNFGDG TSSTSVSPSH TYTRAGTYLV TLTVKDTQNA TASSSSSVTV
SEPTTPGETP SSGGGGSLSW LSLMLLGGFA WRRQRQ
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