Gene Shewmr4_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0087 
Symbol 
ID4250966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp97983 
End bp98378 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content49% 
IMG OID638116629 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_732225 
Protein GI113968432 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAAAC AAGTTGGCAA TACTCAGATC CAAGCAAAGC ATCTCGCCAG TTGCCACTGT 
GGCGCCGTGG TGTTGGAGTT ATCGCTGCCC AATGGCATTG AAATGCCAAG ACGTTGTGAT
TGCTCTATCT GTCGTCGCAA GGGGGCTATC GTCGGCTCAG TGCCGCTGAC GGGATTGAAG
ATTATCAAAG GCGAGACCGC ATTAAAGTGC TACGAATTTA ATACCAAAAC GGCCAAACAT
TACTTTTGCT CCGTGTGCGG CATTTATACC CATCATCAAA GGCGCTCTAA TCCCAATGAA
TATGGCTATA ACCTTGGTTG CCTCGAAGGC GTTAATCCCT ATGAATTAGG CGATGTGCCG
GTTTGCGATG GGGTGAATCA CCCGGCGGAT CGTTAA
 
Protein sequence
MIKQVGNTQI QAKHLASCHC GAVVLELSLP NGIEMPRRCD CSICRRKGAI VGSVPLTGLK 
IIKGETALKC YEFNTKTAKH YFCSVCGIYT HHQRRSNPNE YGYNLGCLEG VNPYELGDVP
VCDGVNHPAD R