Gene Shewmr4_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0077 
Symbol 
ID4250956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp88274 
End bp89584 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content52% 
IMG OID638116619 
Producthypothetical protein 
Protein accessionYP_732215 
Protein GI113968422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG CGAAACCCAT AGCAGAATCA ACGACCCGCA TCGGTACTAG CCATTCGCTC 
AATCCCTTTA ACGGTATGCT GCGCCTGTGG TTTTTTGATG TGGGCAGCGT GAGTTTTATA
GGCACAGGCA TATTTGGCTT GGCTCTGAGT GTGTTAGCGG GATGGGCGGG GCAAAAAGCG
AGTTTCGATA TTTTTGTCAC TATGGGGCTA GTGTCTACCT CGGCAGCGGT GGCATGGCAG
CTGATCCGCC TGATGGCGAG TGAGTGCTCC ATCTTAATCC CCCGTTATCG GCAGAATATT
TTTATCCAGT GTGAAGTGAT GCTGATAGGC GCCTTTAGCC TTGCGGTGTT GCAGTGTGTG
CTGTTTGACC TGACCGATAC TCTGTCGTTA CTGGTCTTTG CCCAAGGGAT AAGTCTTGGG
TTTATCTTGT TGTGCCTGCG ACAAACCCAA TGGTTTTACA GCTCCTTTTT ACTGTTTATC
TTAGTGCCGT TTTCCAACGA GTTGGCGGAG CAAGTGCCGT TGTGGCTGAG CATCATAGTG
CTGTTTGTGT TAGCCGCTTT GATTTGGCGC CGATGCTTAG TGTTACCTTG GCGGGTGGAG
GCACGAAGTG TGTATCTTAA CGGCTTGGAA ATGGGCTGGT TTTGGCTGCC CAGCCTGCAA
TCCATACGGA TATTGACTCG GTTAGAGCGT TATCTGCATC CGGTTAATTT TTTTATCGGT
CCTATGCTGA CCGTGTTGCT GCTGTTGCTC CCCGTGTTAA CCATCGGGCT TGGGATCGTC
TCCCACGAAC TGCATTGGAA CTTCCCGGTA TTACTGCTAC TGGCACAATT TAGTGTGATT
AGTTGCTCGT TGGTGCATTG GAGCCGTGTA CAACGCTCTC GGGCGACTGA AATGCTGCTG
TTGATGCCAA GCTTCGACGG CCGTGCTGGC TTAGTTAAGG CCTTTGGTCG TGGTCAACAA
CGCTTGCTGC TTCTGCTCAG TTTGAGCGTG TTAATCTGCA GTCTGTTTGT CACTTGGCTC
GATGGTGATT TGAGCTTACC TCTGCTGGCG CACATAGTGA TGAGCACATA TTGGGCCTGC
GCCTTAGTGT TAGGGCTAGG TTGCCTGTGT CGCCGCGTAT TGCAGGTGAG CCTGACCATG
CTGGTGGTGC TTGGGCATTC GCTCTGGGTG TCTATTAGCC TCGCGGCGCT GCAACACGAG
GGCAGTCTGC TCTATTGGTC ACTGGGTAAT CTAGTGCTAC TGATCCTTGG TCAAATCGCA
CTGATTTGGG GCAGTAAAAA GCTCTGGCAG GGCGACATTA CCGGGCTCTA A
 
Protein sequence
MSAAKPIAES TTRIGTSHSL NPFNGMLRLW FFDVGSVSFI GTGIFGLALS VLAGWAGQKA 
SFDIFVTMGL VSTSAAVAWQ LIRLMASECS ILIPRYRQNI FIQCEVMLIG AFSLAVLQCV
LFDLTDTLSL LVFAQGISLG FILLCLRQTQ WFYSSFLLFI LVPFSNELAE QVPLWLSIIV
LFVLAALIWR RCLVLPWRVE ARSVYLNGLE MGWFWLPSLQ SIRILTRLER YLHPVNFFIG
PMLTVLLLLL PVLTIGLGIV SHELHWNFPV LLLLAQFSVI SCSLVHWSRV QRSRATEMLL
LMPSFDGRAG LVKAFGRGQQ RLLLLLSLSV LICSLFVTWL DGDLSLPLLA HIVMSTYWAC
ALVLGLGCLC RRVLQVSLTM LVVLGHSLWV SISLAALQHE GSLLYWSLGN LVLLILGQIA
LIWGSKKLWQ GDITGL