Gene Shewmr4_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0075 
Symbol 
ID4250954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp87002 
End bp87367 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content54% 
IMG OID638116617 
ProductGntR family transcriptional regulator 
Protein accessionYP_732213 
Protein GI113968420 
COG category[K] Transcription 
COG ID[COG1725] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAC TTTTAAATGT CAACCCCAGC AGTGGTGAGC CAATTTACAA GCAATTACAC 
GAGCAAATCG TGCGCTTGAT TGTGGGCGGC CAGTTGCAAG AGGAAGACGT ATTACCCTCA
GTGCGCCAAA TTGCTGAATA TCTTGCGGTC AATCCAATGA CGGTGTCCCG CGCGATTCAG
CAATTGGTCG ATCAAGGTTG GCTAGAGCGC CGCCGTGGTC AGGCGACTAG GGTTGCGGCG
CGTACCGAGG CGATGGAGTC GGGCGTGAGT CTGCTCGAGC CGCAATTAGA TGCCTTGCTG
GCGCAGGCAA AGCAGCTGGG CGTGAGTTTG CCCGAGTTAC TGCAATTGAT TAATGAGCGT
TGGTAG
 
Protein sequence
MLELLNVNPS SGEPIYKQLH EQIVRLIVGG QLQEEDVLPS VRQIAEYLAV NPMTVSRAIQ 
QLVDQGWLER RRGQATRVAA RTEAMESGVS LLEPQLDALL AQAKQLGVSL PELLQLINER
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