| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0051 |
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| Symbol | |
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| ID | 4250666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 59838 |
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| End bp | 61199 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638116593 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_732189 |
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| Protein GI | 113968396 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000243033 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGTTCAAT GGCATCCTTC GCTCACCCTA GAGCACACAC CTAAAAGCGG TAAAAAACTC
TTTGGCGCGC CGCCCTTTAT CTTAAGTGTC AGTTTTGCTC TGCTGATCTT ACTTGGCACT
TGCTTGCTTA AACTGCCTAT CGCCACCGAG TCGCCTATTA CTTGGCTGCA AAGCCTCTTT
ACCGTGACCT CGGCGGTGAC GGTCACAGGG CTTGTGGTCG TCGATACTGG CAGTATGTTC
ACGCCCTTTG GCCAAGTGAT TATCGCGCTG TTAATTCAAT GCGGCGGCCT AGGCTTGATG
ACCTTTGCCA TAGTCACGCT AATAGCGCTG GGCGGTAAGA TAGGTTTCTT GCAGCAAACA
GTGGCGAAAG AAGCGTTTAA TCAAACCGAT ACCTCTACCT TAGTCTCGAC TGCTAAGGCC
GTACTGGTGT TTTCGCTATT GGTTGAAGCC GTGGGTATGC TGATTTTATC TGTCTACTGG
AGCGGCGAAT TGGGTTGGCA AACTAGCTTA TTTCATGGCT TCTTTTATAC TATTAGCGCC
TTTAATAACG CGGGTTTTGC CCTAAGCCCA GATAGCTTAA TCCCCTATGT GGCCGACCCA
GTCGTTAACC TCACCATCAC AGGTTTATTT ATTGTGGGCG GCCTTGGGTT TTCGGTGTGG
ATTGACCTTA AGCGCAATAA ACGTTGGTCG AAACTCACCG TCTACAGCCG CATGATGATT
ACTGGCACCA TACTGATCAA TGCCGTGGCC GTGATAGCCA TTTACCTGAT TGAATACAAC
AACCCCAACA CCCTCGCGCC CTTAAGCGAG CTCGGCAAAT GGTTGGCCTC TTGGTTTCAA
GCCGTGACCC CGCGCACCGC AGGCTTTAAC ACCTTGCCCA TAGACCAACT CGAGGATGGT
TCCACCCTAT TGATTTTAGT GCTGATGTTT ATCGGCGGCG GCTCCCTCAG CACCGCCAGC
GGCATTAAAG TCGTGACCTT TATGGTGCTT ATTCTCGCCA CCTACGGCTA TTTACGCCGC
GATGAAGCAG TGTATGTGTT TAAGCGGGAA ATCCCCAAAG ATACCGTCAG CAAAGCCTTA
GCGCTAACCA TCATCTCTTT GGTCGTATCT TGGCTGGCCA TCTTCATATT GGTATTAAGC
GAGAAAGCGC CGTTAGTCGA TATCGTCTTC GAGGCCATAT CCGCACTGGG CACAGTCGGT
TTATCCCGCG GTTTGACAGG TAACTTAACT AGCCTAGGCC AAGCCATCAT CATCTTTATG
ATGTTCATGG GTCGCCTCGG CCCACTGATG TTGGCCTACT TCCTTGCCAA CCCAAGGGTA
AAAAAGCTGC GCTATGCAGA AACCAAATTG GCAATTGGGT AA
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| Protein sequence | MVQWHPSLTL EHTPKSGKKL FGAPPFILSV SFALLILLGT CLLKLPIATE SPITWLQSLF
TVTSAVTVTG LVVVDTGSMF TPFGQVIIAL LIQCGGLGLM TFAIVTLIAL GGKIGFLQQT
VAKEAFNQTD TSTLVSTAKA VLVFSLLVEA VGMLILSVYW SGELGWQTSL FHGFFYTISA
FNNAGFALSP DSLIPYVADP VVNLTITGLF IVGGLGFSVW IDLKRNKRWS KLTVYSRMMI
TGTILINAVA VIAIYLIEYN NPNTLAPLSE LGKWLASWFQ AVTPRTAGFN TLPIDQLEDG
STLLILVLMF IGGGSLSTAS GIKVVTFMVL ILATYGYLRR DEAVYVFKRE IPKDTVSKAL
ALTIISLVVS WLAIFILVLS EKAPLVDIVF EAISALGTVG LSRGLTGNLT SLGQAIIIFM
MFMGRLGPLM LAYFLANPRV KKLRYAETKL AIG
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