| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0028 |
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| Symbol | |
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| ID | 4250714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 33117 |
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| End bp | 34073 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116567 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_732167 |
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| Protein GI | 113968374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.709441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00475764 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAACCAC TCAATATCAT CTTCGCCGGA ACACCGGATT TTGCCGCTCG CCATTTACAG
GCGCTGATTA ACTCACATCA CAATGTGATT GCCGTCTACA CTCAGCCGGA CAGACCCGCA
GGGCGCGGTA AAAAACTCAC CGCCAGCCCA GTTAAAGAAC TCGCAGTCAG CCACAACATT
CCGGTTTATC AGCCAGGCTC ACTGCGTAAA GAACCCGCAC AGCAAGAACT TGCCGCCCTC
AATGCCGATA TTATGGTAGT GGTCGCCTAC GGCTTGATTC TGCCAAAAGT GGTGCTCGAC
ACGCCGCGTT TAGGCTGTAT CAATGTTCAC GGTTCTATTC TGCCACGCTG GCGCGGTGCA
GCGCCGATTC AACGCGCGTT GTGGGCCGGC GATAAAGAGA CCGGCGTGAC TATCATGCAA
ATGGATGTCG GCCTAGATAC TGGCGACATG CTGCTGAAAA CCTACTTGCC GATTGAAGAT
GATGATACTT CAGCCACCCT TTACGAGAAG TTAGCTCTGC AAGGACCAGA CGCGCTACTG
CAAGCACTCG AAGGTTTAGC CAACGGCACT CTAACGGCTG AAAAACAAGA TGAAGCCTTA
GCGAACTACG CCGAAAAACT CAGTAAAGAA GAAGCGAGGC TCGATTGGAG CAAATCTGCG
ACCCAATTAT GGCAAGAAGT CCGCGCCTTC AATCCTTGGC CTGTGAGCTA TTTTGAGCAC
CAAGGCAATA CCATCAAGGT GTGGCAGACC CAAGTCAGCA CCACCAGCAG CAATGCCGCA
CCTGGCACTA TTATCAGCGC CAGTAAAAAA GGCATTGAAG TCGCCACCGG CGATGGTGTG
TTAACTCTGC TCAGCATGCA ATTACCCGGT AAAAAACCAC TCAGCGTGGC CGACATACTC
AACGCCCGCG GCGACTGGTT TACCCCAAAT ACTCGTCTAA ATCACGAGGC GCAATAA
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| Protein sequence | MKPLNIIFAG TPDFAARHLQ ALINSHHNVI AVYTQPDRPA GRGKKLTASP VKELAVSHNI
PVYQPGSLRK EPAQQELAAL NADIMVVVAY GLILPKVVLD TPRLGCINVH GSILPRWRGA
APIQRALWAG DKETGVTIMQ MDVGLDTGDM LLKTYLPIED DDTSATLYEK LALQGPDALL
QALEGLANGT LTAEKQDEAL ANYAEKLSKE EARLDWSKSA TQLWQEVRAF NPWPVSYFEH
QGNTIKVWQT QVSTTSSNAA PGTIISASKK GIEVATGDGV LTLLSMQLPG KKPLSVADIL
NARGDWFTPN TRLNHEAQ
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