| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0027 |
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| Symbol | |
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| ID | 4250713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 31828 |
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| End bp | 33117 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116566 |
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| Product | sun protein |
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| Protein accession | YP_732166 |
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| Protein GI | 113968373 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.930823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0023625 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAACT TGCGTGCACT GGCGGCCAAA GCCATCTTCG AAGTCTTAGA GAAAGGTGTG
TCACTTTCAG TTGCCCTACC AGAACAGCAA AAGCATCTAG CAAGTGGTAA AGATAAAGCC
CTGCTCGCAG AGCTCTGCTA CGGCGTGATG CGCACCTTAC CGCAGATCGA AAAACGCGTG
GCTGAGTGTT TGGCTAAGCC GCTGAAAGGT AAGCAAAGGA TTATCCACCA GCTATTAATT
GTTGGCTGTT ATCAACTTTA CTTCACCCGT ATTCCAAGCC ACGCCGCCAT CTCCGAAACC
GCCGAGGCTT GTCGTCAGTT AAAATTTGAG GGCATGGTAA AGGTCGTCAA TGGCGTGCTG
CGTAATATTC AGCGCCAATT AACGCCGCTA AGCACTGAGT CAGAGACCTT AAGCTACAAC
ACGCCGGGCT GGTTAATTAA GCGCTTAAAA GCCGCATATC CCGATAATTG GCAAGAGATA
ATCCTGCAAA GCCATGAGCG TCCACCTATG TGGCTACGCA ACAATCGCCT CTCCCAAAGC
CGCGATGAAT ACCTTGCCGC CCTGAGTGAG CTTGAGATAG AAGCGAGTGC TGGCCTCAGT
GATGATGCCA TTCTACTTGC CCATCCTAAG GATGTGACGA CATTACCGCG CTTCCACGAA
GGTGCGGCAT CGGTGCAAGA TGGTGCAGCA CAATGGGCCG CGACCTTACT GGCTCCGCAA
GCCAACGAAC TGATCCTCGA TGCCTGCGCG GCACCGGGCG GTAAGAGTTG CCATTTACTC
GAACTTGAAC CCAGCATCCA ACTGGTCGCC GTCGATTTCG ATGCTAAACG TCTCGAGCGC
GTGCAACAGA ACCTTGACCG TTTGTCATTA AAAGCGGAAG TTATTCATGG CGATGCAGCC
AACATCGACT CATGGTGGCA GGGTGAACAG TTTGATCGTA TCTTACTCGA CGCGCCTTGC
TCGGCGACGG GCGTAATCCG CCGTCATCCC GATATCAAGT GGTTACGCAA AAACCATGAC
ATCGAAGAAC TGGCTGAGCT GCAAAGACAA ATTCTTGATC ACTGCTGGAA GTGGCTCAAA
CCCGGTGGCA CACTCCTGTA TGCAACTTGC TCTATTTTGC CGCAGGAAAA TCGAGACCAA
ATTAGTGCAT TTTTAGCCAG AACCGCAGAT GCTAAGCTAG ACACACTTGC CCAGCAGGCT
TCAAGCCAAG ATATAGGTTG GCAAATCACG CCGGGACAAC ACAACATGGA TGGGTTTTAT
TACGCCCGTT TATTGAAAGC GACCCATTAG
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| Protein sequence | MMNLRALAAK AIFEVLEKGV SLSVALPEQQ KHLASGKDKA LLAELCYGVM RTLPQIEKRV
AECLAKPLKG KQRIIHQLLI VGCYQLYFTR IPSHAAISET AEACRQLKFE GMVKVVNGVL
RNIQRQLTPL STESETLSYN TPGWLIKRLK AAYPDNWQEI ILQSHERPPM WLRNNRLSQS
RDEYLAALSE LEIEASAGLS DDAILLAHPK DVTTLPRFHE GAASVQDGAA QWAATLLAPQ
ANELILDACA APGGKSCHLL ELEPSIQLVA VDFDAKRLER VQQNLDRLSL KAEVIHGDAA
NIDSWWQGEQ FDRILLDAPC SATGVIRRHP DIKWLRKNHD IEELAELQRQ ILDHCWKWLK
PGGTLLYATC SILPQENRDQ ISAFLARTAD AKLDTLAQQA SSQDIGWQIT PGQHNMDGFY
YARLLKATH
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