| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0022 |
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| Symbol | |
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| ID | 4250708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 27253 |
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| End bp | 27777 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638116561 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_732161 |
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| Protein GI | 113968368 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG4635] Flavodoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000530188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000763246 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGACAC TAATCATCTA TTCGACAATA GATGGCCAAA CACTGGAAAT CTGCCGCAAA
ATCAAAACGC TTGCCGAACA AGCGGGTGAG CAGGTGTCGT TAGTGACCTT AGAACAGGCC
GAAGCCTTAA GCCTTGCCGA TTTCGATAAA GTGTTGATTG GTGCGAGCAT TCGTTATGGC
AAACATAGGC CCGATCTCTA CCAGTTTGTG AATCGTAACC ATGCAGTGCT GGACAGTAAA
ATCAACGGCT TCTTTACCGT GAATGTGGTG GCGCGTAAGC CATTAAAGAA CACGCCAGAA
ACCAATCCTT ACATGCAAAA GTTCCTCAAA TTATCCCTGT GGCAGCCACA GCAATTGGCG
GTGTTTGCGG GCAAGATTGA TTACCCTAAA TACGGCTTGT TTGACCGCAC TATGATCCGT
TTTATCATGT GGATGACAAA GGGACCGACC GATCTAAAGG GCACCTTCGA GTTTACCGAC
TGGGGTAAAG TCGAAGCCTT TGGGGTACAC TTTAGCAAGC TGTAA
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| Protein sequence | MQTLIIYSTI DGQTLEICRK IKTLAEQAGE QVSLVTLEQA EALSLADFDK VLIGASIRYG
KHRPDLYQFV NRNHAVLDSK INGFFTVNVV ARKPLKNTPE TNPYMQKFLK LSLWQPQQLA
VFAGKIDYPK YGLFDRTMIR FIMWMTKGPT DLKGTFEFTD WGKVEAFGVH FSKL
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