| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4293 |
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| Symbol | |
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| ID | 4475947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | + |
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| Start bp | 175971 |
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| End bp | 177167 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639720650 |
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| Product | outer membrane porin |
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| Protein accession | YP_863808 |
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| Protein GI | 117676232 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0195017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.981008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTGTTAT TAGCAATGAG TAATAATGCA CTCTCTAATG ATGATATTGA GAGTTTTTCT
GAATGGATAC ACAATGGTAA TGTTGGAGGT ACAGCGAGAT CGTACTATTT CGAACAAGAT
TTTGACGATT CAAATACAGA GAATAGCTCG ATTTGGGTGA ATGGTGGTAA TGTTACTTTT
AATACATCAG AGTTTAATGG GTTTAAATTG GGAGGAGAGG TACAGGGGTC ATACGTTAGT
AATATCAATG ATGATGATGA TACAACTGCG GGAGATATGA ACGCACAAGG TCTTGTATTA
TCGGAAGCTT TTTTGAAGTA TCAGTTTGGT GATACTGTGT TTTCTGGAGG TAGACAACAC
TTTTCATCAC CCCTTATCGC TAACTCAGGT TCAAGATTGA TAAATGAATC TTTTGAAATG
TATCAGGTGT CTTCAAGTCA TTTTGATGGT ACTGATATTT CGATTGGATA TGTGACTAAA
TATCAGACTC GAACAGATAA ATCGTTTTAT GTTGATAATG AATTTGTTGA TTTTGATTTT
AATGGTTCTG GCTCTCCTGG CGATTTTTAT AAAATAGGTA ATGATGGCGT TTTTTTCGTA
CAAGTTAACA AGCGAATCGC TAAAAAATTC AAAGTTAACT CACAGTACGC AAATGTAATA
AATGAAGTCC AAGCACTTTA TGCGGATGTC GAATATACAT TGCCAACTAA CTTTAACAGT
TATATTGCAA TGCAATATTA CAAAACTAAG TGGGATAAAA ATGAACTAGT CGATAATGAT
CTTTTGGGCT TTAAAGTAGG TTTCAGTCAG GGAGGAGTAG ATTTTTTTGC TGGTTATACA
TTAGCTGGAG GAAATGAAGG AGATAATAGA GTTTTTAGAG GCATTGGTCA AGGAGCTTAT
TATCAGTTTA CTGCCACTAC TAAAACTGCG GGTGTTGGGG CATTTGAATC TGGAACAAAT
TCGTATCAAT TGGGGTTAGG TTCTGCTATC TCTAATCTTA AAGGTAAAAT ATTTTATACA
TCTTTTGACA ATCCCATAGT GGGAAAAGAT TTAAATGAAT GGACGGTTAA TCTTGCATAT
CAATTTGATG GTAAACTCGA AAATATCGGT ATATCAATTG ATTTTTCAAT ATTGGATTAT
GAAAACAATC AAAAAGACGC TACAGATTTA AGAACGAAAT TCACTTACAG CTTTTAA
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| Protein sequence | MVLLAMSNNA LSNDDIESFS EWIHNGNVGG TARSYYFEQD FDDSNTENSS IWVNGGNVTF
NTSEFNGFKL GGEVQGSYVS NINDDDDTTA GDMNAQGLVL SEAFLKYQFG DTVFSGGRQH
FSSPLIANSG SRLINESFEM YQVSSSHFDG TDISIGYVTK YQTRTDKSFY VDNEFVDFDF
NGSGSPGDFY KIGNDGVFFV QVNKRIAKKF KVNSQYANVI NEVQALYADV EYTLPTNFNS
YIAMQYYKTK WDKNELVDND LLGFKVGFSQ GGVDFFAGYT LAGGNEGDNR VFRGIGQGAY
YQFTATTKTA GVGAFESGTN SYQLGLGSAI SNLKGKIFYT SFDNPIVGKD LNEWTVNLAY
QFDGKLENIG ISIDFSILDY ENNQKDATDL RTKFTYSF
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