Gene Shewana3_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2755 
Symbol 
ID4479399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3287109 
End bp3290351 
Gene Length3243 bp 
Protein Length1080 aa 
Translation table11 
GC content49% 
IMG OID639727361 
Producttranscriptional regulator 
Protein accessionYP_870388 
Protein GI117921196 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.647625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGC GATTCCCCCG CCTTAGTCGA TGCTCAAGCA ATGGAAATCC TATGAGTGAC 
AGCACATTTT TTTTTGGTGA ATGGCAAGTC AATCCCAGCG CCAACAGCCT GCTCCTTGGT
AAACAAGTTA AACAACTTGA ACCTAAGGCG ATGGATGTGT TGTTGTTTCT CTGCCAAAAC
GCCGGTGAAG TGGTCAGCAG CGACGAAATT GTTAGCCATT GCTGGCCGGG GGTCGACACG
GGCGACAATC CACTGCACAA GGTTATCAAC CAGTTACGTC GCGCACTTGG CGATAGCGCC
ACCGAATCCC GTTACATTGA GACCATTCGT AAACGTGGCT ATCGCACCTT AGCCGAGGTT
CGCTTTCCCG TTGGCCATGA AGCCAGCGCA ACACCACAGG CTTGGCAAGG CGGCTCGCCG
TTTCCAGGCC TGCAAGCCTA CAGCGCCAAC TATGCCGACG TATTCTTCGG CCGCAGCGAG
CAAATTAGCA CGCTGCTGAA TCGCATTAGC CAACAAATCC AATTTGGCCG CGCCTTCTGC
TTAATTTTAG GCCCGAGTGG TAGCGGTAAA TCTTCCTTAA TTAATGCCGG TGTTTTGCCT
AACCTTATGG CCGCCAATGG CTTTAATGGC GTTGGGGTTG TGGCCTACAG CAGCCTCGAT
TTTGCCGATG TCAGCAAGGG ACAACTGCTC ACCGATTTGG CCAGCGCCAT GCTCGACTGG
GAGCTAAATG ACACCCCAGT ATTTGAGGGA ATGAGCGCCG ATACGCTCGC CGCCAAGCTT
GAACAAAATC CGCAGAGCAT TGTCGATATA TGTAAACAAA GCCTTAAAAA TCAGACCTAT
GCTACACCAC GCTTTGCCTT ATTTATCGAC CGATTAGAGG TCTTATTATC ATCGCCGCTG
TTTAGCGATA CCGAGCGCAG CGCCTTTATC GAGCTGTTAG AGCGTCTTGC TACTTCCCAT
GCAGTGTTAA TTTTAAGTGC CTGTCGCAAC GACTTTTATC CGCTGCTAGT CAATTACCCC
AGCCTGATGG CAGGCAAAGC GCGCGGCGCC CATTTCGACT TAGCGCCGCC CACTCGCACC
GAGCTGTTGC AGATGATCCG CCTGCCGGCC GTTGCCGCCA ATTTAACCTG GGAAATCGAT
AACGACACCG CCATGCCGCT CGATGAAATG CTCTGTAGCG ATGCCGCCAG CAACCCAGAT
GCGCTGCCTA TGCTGCAATA CACCTTGCAG GCGCTGTATT TACAACGCAG CGACGATGAC
AAACTATTGG TCTCTGTATA TCGCACCTTG GGCGGTATCG AAGGTGCTAT CGGTAAAAAT
GCCGAGCAGG CCATCTCCCA TTTAACCGAG GCCGAAAAAG CCAGTCTGCC ACGGATTTTA
TCCCTGTTAG TCACCCTGCG TGAGGATGAA AAATCCATCA CCAGCCGCAC CGCCCGCTGG
TCGCAGTTGC AAAGCGCGGC CGAAACAGCC CTAGTGCAAG CCATGGTCGA TAGCCGCTTA
TTTGTGTCCC ATCTGCAAAA TGGTGAGCCC TGTTTTAGCA TCGCCCACGA AGCCCTGCTG
CGCCGCTGGC CAAGGGCGAC GGCGTGGATC AGCGAACATA ACGACAGCCT TAGCATTAAG
AGCCGACTAC AGCATTTATC CCAGCGCTGG CTCAGCGAAG CCAAACACAG CGCCTATTTG
CTGGCCGAGG GTAAACCTTT AAAAGAGGCC CAAAGCCTTA GGCAAAACCC CTTATTTGAC
TTAGACGAGC GGGAAACAGA CTTTATTGCC GCCTCCAGCA AACGCGCCAC TATGCTGCGC
TGGACGAGGC GCGTTACCGT CGCCCTGCTG TGCGTACTCA CCTTAACCTC AGTCATTATG
AGTGTTCGCA GTATCGAAGC CGAAAAGCTG GCCCAGCAAA AACGCCTCGC CGCTGAAGAT
CTGCTCGGGT TTATGGTGGG TGACTTCGCC GATAAAATGC GCGGCATCGG CCGGATGGAC
TTACTCGACG GGATCAGCAA TAAGGCATTG GAATATTTCA CGGATTTCTC CAGCCAAGAC
GATGAGAAGT ACTTAAGCTT CGACGCCCGC TTCCAGCATG GACAAACCTT AGAGGCCATG
GGCGAAGTCG CCTATTCACG CAATAAAATC GATGAAGCCC GCAGCGCTCT ACTCGCCGCA
CAGGAAAAAA TGCTACCGCT GCTCGAATTG CAGCCCGAAA ACTTAGCCCT GCTAAAAACC
TTAGGCGCCA ACGCCTTTTG GTTGGGTCAG CTTAAATATG ATGTGAAAGA TTGGGCGGCA
TCTCGCCCGT TCTTCGAGCA GTACTTAGCC TATAGCCAAA CCATGTACAC CCTAGCGCCA
GAGGATAAAG ATGCGCTGAT GGAACTATCC TATGCCCATA ACACCTTGGG CTCAGTGTCG
ATGAAGCAAC AGGACTTTGC CAAGGCGCAG CAAGATTTTG AGGAATCATT ACGATTAAAG
CTATTGGCAC TGGCCAAAGC CCCCGAAGAT AGCCAACTAA TTGCCGATGT GGCTAATACG
CGTTCTTGGT TAGCGAGTGC GGCAGTGTCT TTGGGAGACA TAAACACAGC AATATCCATC
CATAAAGAGC TGCAACAAGA ATTAGAGCTA GGTAATCATA TTAAAAGTCC TTATTTGCTA
GAAAAACTAA GTGGAAGCTA CCAAACTCTC GCAGATTTGC TTAGTTATAC TGAACATAAA
GATGAAGCTC TTAATCAAGC AAAGTTAAAC CTATCAACTG TTGAAGAAAT ACTAAGGCAA
GATCCCCAAA ATGACATATG GAAAACATTG AGATATTACT CTGTTTTCCA AGTAATCAGA
TTAAGTAACT CTTCAACTGA GCAAACTCCA GAGAACAAAA TTAGCGTACT TGAAGCTTCG
ATGTCTGCAG ATAAAAATCT TAATGAAACT CAAAAAAAGT CTGAGGTATG GGCTAACTTT
TACTTATCGT CATCTTATTT CCTCATGAAC TCTGGAAAAT ATAAAGATGC AAAAACTTAC
GCAGAAAAAG CATACGAGTC GTATCTAACA TTATCAAAGA ATTTTTCGCA AAATATGGCT
TTCGAACTCA ATTTAGCAGA AAGTGAGTTA CTAATTTCTG AGAACAACGA ATACCCTATT
GAAATTACTA ATTCATTTTG CCACAAAGCA AATGAACGCA TTAAAAAACT AATGGAATTA
AATAAAGAAC CAAAGTATAA ACTCTTATTT GAGCGTTCTA TTAATTGTAC ACATGCACAA
TGA
 
Protein sequence
MAPRFPRLSR CSSNGNPMSD STFFFGEWQV NPSANSLLLG KQVKQLEPKA MDVLLFLCQN 
AGEVVSSDEI VSHCWPGVDT GDNPLHKVIN QLRRALGDSA TESRYIETIR KRGYRTLAEV
RFPVGHEASA TPQAWQGGSP FPGLQAYSAN YADVFFGRSE QISTLLNRIS QQIQFGRAFC
LILGPSGSGK SSLINAGVLP NLMAANGFNG VGVVAYSSLD FADVSKGQLL TDLASAMLDW
ELNDTPVFEG MSADTLAAKL EQNPQSIVDI CKQSLKNQTY ATPRFALFID RLEVLLSSPL
FSDTERSAFI ELLERLATSH AVLILSACRN DFYPLLVNYP SLMAGKARGA HFDLAPPTRT
ELLQMIRLPA VAANLTWEID NDTAMPLDEM LCSDAASNPD ALPMLQYTLQ ALYLQRSDDD
KLLVSVYRTL GGIEGAIGKN AEQAISHLTE AEKASLPRIL SLLVTLREDE KSITSRTARW
SQLQSAAETA LVQAMVDSRL FVSHLQNGEP CFSIAHEALL RRWPRATAWI SEHNDSLSIK
SRLQHLSQRW LSEAKHSAYL LAEGKPLKEA QSLRQNPLFD LDERETDFIA ASSKRATMLR
WTRRVTVALL CVLTLTSVIM SVRSIEAEKL AQQKRLAAED LLGFMVGDFA DKMRGIGRMD
LLDGISNKAL EYFTDFSSQD DEKYLSFDAR FQHGQTLEAM GEVAYSRNKI DEARSALLAA
QEKMLPLLEL QPENLALLKT LGANAFWLGQ LKYDVKDWAA SRPFFEQYLA YSQTMYTLAP
EDKDALMELS YAHNTLGSVS MKQQDFAKAQ QDFEESLRLK LLALAKAPED SQLIADVANT
RSWLASAAVS LGDINTAISI HKELQQELEL GNHIKSPYLL EKLSGSYQTL ADLLSYTEHK
DEALNQAKLN LSTVEEILRQ DPQNDIWKTL RYYSVFQVIR LSNSSTEQTP ENKISVLEAS
MSADKNLNET QKKSEVWANF YLSSSYFLMN SGKYKDAKTY AEKAYESYLT LSKNFSQNMA
FELNLAESEL LISENNEYPI EITNSFCHKA NERIKKLMEL NKEPKYKLLF ERSINCTHAQ