Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2755 |
Symbol | |
ID | 4479399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3287109 |
End bp | 3290351 |
Gene Length | 3243 bp |
Protein Length | 1080 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727361 |
Product | transcriptional regulator |
Protein accession | YP_870388 |
Protein GI | 117921196 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.647625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGC GATTCCCCCG CCTTAGTCGA TGCTCAAGCA ATGGAAATCC TATGAGTGAC AGCACATTTT TTTTTGGTGA ATGGCAAGTC AATCCCAGCG CCAACAGCCT GCTCCTTGGT AAACAAGTTA AACAACTTGA ACCTAAGGCG ATGGATGTGT TGTTGTTTCT CTGCCAAAAC GCCGGTGAAG TGGTCAGCAG CGACGAAATT GTTAGCCATT GCTGGCCGGG GGTCGACACG GGCGACAATC CACTGCACAA GGTTATCAAC CAGTTACGTC GCGCACTTGG CGATAGCGCC ACCGAATCCC GTTACATTGA GACCATTCGT AAACGTGGCT ATCGCACCTT AGCCGAGGTT CGCTTTCCCG TTGGCCATGA AGCCAGCGCA ACACCACAGG CTTGGCAAGG CGGCTCGCCG TTTCCAGGCC TGCAAGCCTA CAGCGCCAAC TATGCCGACG TATTCTTCGG CCGCAGCGAG CAAATTAGCA CGCTGCTGAA TCGCATTAGC CAACAAATCC AATTTGGCCG CGCCTTCTGC TTAATTTTAG GCCCGAGTGG TAGCGGTAAA TCTTCCTTAA TTAATGCCGG TGTTTTGCCT AACCTTATGG CCGCCAATGG CTTTAATGGC GTTGGGGTTG TGGCCTACAG CAGCCTCGAT TTTGCCGATG TCAGCAAGGG ACAACTGCTC ACCGATTTGG CCAGCGCCAT GCTCGACTGG GAGCTAAATG ACACCCCAGT ATTTGAGGGA ATGAGCGCCG ATACGCTCGC CGCCAAGCTT GAACAAAATC CGCAGAGCAT TGTCGATATA TGTAAACAAA GCCTTAAAAA TCAGACCTAT GCTACACCAC GCTTTGCCTT ATTTATCGAC CGATTAGAGG TCTTATTATC ATCGCCGCTG TTTAGCGATA CCGAGCGCAG CGCCTTTATC GAGCTGTTAG AGCGTCTTGC TACTTCCCAT GCAGTGTTAA TTTTAAGTGC CTGTCGCAAC GACTTTTATC CGCTGCTAGT CAATTACCCC AGCCTGATGG CAGGCAAAGC GCGCGGCGCC CATTTCGACT TAGCGCCGCC CACTCGCACC GAGCTGTTGC AGATGATCCG CCTGCCGGCC GTTGCCGCCA ATTTAACCTG GGAAATCGAT AACGACACCG CCATGCCGCT CGATGAAATG CTCTGTAGCG ATGCCGCCAG CAACCCAGAT GCGCTGCCTA TGCTGCAATA CACCTTGCAG GCGCTGTATT TACAACGCAG CGACGATGAC AAACTATTGG TCTCTGTATA TCGCACCTTG GGCGGTATCG AAGGTGCTAT CGGTAAAAAT GCCGAGCAGG CCATCTCCCA TTTAACCGAG GCCGAAAAAG CCAGTCTGCC ACGGATTTTA TCCCTGTTAG TCACCCTGCG TGAGGATGAA AAATCCATCA CCAGCCGCAC CGCCCGCTGG TCGCAGTTGC AAAGCGCGGC CGAAACAGCC CTAGTGCAAG CCATGGTCGA TAGCCGCTTA TTTGTGTCCC ATCTGCAAAA TGGTGAGCCC TGTTTTAGCA TCGCCCACGA AGCCCTGCTG CGCCGCTGGC CAAGGGCGAC GGCGTGGATC AGCGAACATA ACGACAGCCT TAGCATTAAG AGCCGACTAC AGCATTTATC CCAGCGCTGG CTCAGCGAAG CCAAACACAG CGCCTATTTG CTGGCCGAGG GTAAACCTTT AAAAGAGGCC CAAAGCCTTA GGCAAAACCC CTTATTTGAC TTAGACGAGC GGGAAACAGA CTTTATTGCC GCCTCCAGCA AACGCGCCAC TATGCTGCGC TGGACGAGGC GCGTTACCGT CGCCCTGCTG TGCGTACTCA CCTTAACCTC AGTCATTATG AGTGTTCGCA GTATCGAAGC CGAAAAGCTG GCCCAGCAAA AACGCCTCGC CGCTGAAGAT CTGCTCGGGT TTATGGTGGG TGACTTCGCC GATAAAATGC GCGGCATCGG CCGGATGGAC TTACTCGACG GGATCAGCAA TAAGGCATTG GAATATTTCA CGGATTTCTC CAGCCAAGAC GATGAGAAGT ACTTAAGCTT CGACGCCCGC TTCCAGCATG GACAAACCTT AGAGGCCATG GGCGAAGTCG CCTATTCACG CAATAAAATC GATGAAGCCC GCAGCGCTCT ACTCGCCGCA CAGGAAAAAA TGCTACCGCT GCTCGAATTG CAGCCCGAAA ACTTAGCCCT GCTAAAAACC TTAGGCGCCA ACGCCTTTTG GTTGGGTCAG CTTAAATATG ATGTGAAAGA TTGGGCGGCA TCTCGCCCGT TCTTCGAGCA GTACTTAGCC TATAGCCAAA CCATGTACAC CCTAGCGCCA GAGGATAAAG ATGCGCTGAT GGAACTATCC TATGCCCATA ACACCTTGGG CTCAGTGTCG ATGAAGCAAC AGGACTTTGC CAAGGCGCAG CAAGATTTTG AGGAATCATT ACGATTAAAG CTATTGGCAC TGGCCAAAGC CCCCGAAGAT AGCCAACTAA TTGCCGATGT GGCTAATACG CGTTCTTGGT TAGCGAGTGC GGCAGTGTCT TTGGGAGACA TAAACACAGC AATATCCATC CATAAAGAGC TGCAACAAGA ATTAGAGCTA GGTAATCATA TTAAAAGTCC TTATTTGCTA GAAAAACTAA GTGGAAGCTA CCAAACTCTC GCAGATTTGC TTAGTTATAC TGAACATAAA GATGAAGCTC TTAATCAAGC AAAGTTAAAC CTATCAACTG TTGAAGAAAT ACTAAGGCAA GATCCCCAAA ATGACATATG GAAAACATTG AGATATTACT CTGTTTTCCA AGTAATCAGA TTAAGTAACT CTTCAACTGA GCAAACTCCA GAGAACAAAA TTAGCGTACT TGAAGCTTCG ATGTCTGCAG ATAAAAATCT TAATGAAACT CAAAAAAAGT CTGAGGTATG GGCTAACTTT TACTTATCGT CATCTTATTT CCTCATGAAC TCTGGAAAAT ATAAAGATGC AAAAACTTAC GCAGAAAAAG CATACGAGTC GTATCTAACA TTATCAAAGA ATTTTTCGCA AAATATGGCT TTCGAACTCA ATTTAGCAGA AAGTGAGTTA CTAATTTCTG AGAACAACGA ATACCCTATT GAAATTACTA ATTCATTTTG CCACAAAGCA AATGAACGCA TTAAAAAACT AATGGAATTA AATAAAGAAC CAAAGTATAA ACTCTTATTT GAGCGTTCTA TTAATTGTAC ACATGCACAA TGA
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Protein sequence | MAPRFPRLSR CSSNGNPMSD STFFFGEWQV NPSANSLLLG KQVKQLEPKA MDVLLFLCQN AGEVVSSDEI VSHCWPGVDT GDNPLHKVIN QLRRALGDSA TESRYIETIR KRGYRTLAEV RFPVGHEASA TPQAWQGGSP FPGLQAYSAN YADVFFGRSE QISTLLNRIS QQIQFGRAFC LILGPSGSGK SSLINAGVLP NLMAANGFNG VGVVAYSSLD FADVSKGQLL TDLASAMLDW ELNDTPVFEG MSADTLAAKL EQNPQSIVDI CKQSLKNQTY ATPRFALFID RLEVLLSSPL FSDTERSAFI ELLERLATSH AVLILSACRN DFYPLLVNYP SLMAGKARGA HFDLAPPTRT ELLQMIRLPA VAANLTWEID NDTAMPLDEM LCSDAASNPD ALPMLQYTLQ ALYLQRSDDD KLLVSVYRTL GGIEGAIGKN AEQAISHLTE AEKASLPRIL SLLVTLREDE KSITSRTARW SQLQSAAETA LVQAMVDSRL FVSHLQNGEP CFSIAHEALL RRWPRATAWI SEHNDSLSIK SRLQHLSQRW LSEAKHSAYL LAEGKPLKEA QSLRQNPLFD LDERETDFIA ASSKRATMLR WTRRVTVALL CVLTLTSVIM SVRSIEAEKL AQQKRLAAED LLGFMVGDFA DKMRGIGRMD LLDGISNKAL EYFTDFSSQD DEKYLSFDAR FQHGQTLEAM GEVAYSRNKI DEARSALLAA QEKMLPLLEL QPENLALLKT LGANAFWLGQ LKYDVKDWAA SRPFFEQYLA YSQTMYTLAP EDKDALMELS YAHNTLGSVS MKQQDFAKAQ QDFEESLRLK LLALAKAPED SQLIADVANT RSWLASAAVS LGDINTAISI HKELQQELEL GNHIKSPYLL EKLSGSYQTL ADLLSYTEHK DEALNQAKLN LSTVEEILRQ DPQNDIWKTL RYYSVFQVIR LSNSSTEQTP ENKISVLEAS MSADKNLNET QKKSEVWANF YLSSSYFLMN SGKYKDAKTY AEKAYESYLT LSKNFSQNMA FELNLAESEL LISENNEYPI EITNSFCHKA NERIKKLMEL NKEPKYKLLF ERSINCTHAQ
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