| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1461 |
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| Symbol | fadJ |
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| ID | 4479678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1694533 |
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| End bp | 1696662 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726031 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_869101 |
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| Protein GI | 117919909 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000722255 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAAGA CATTTAATTT AACCCGCCGT GAAGACGGTA TCGCCATTCT AATGATGGAC
GTACCCGGCG AAACCATGAA TACCCTCAAG GCAGAGTTTG GCCCTGAGAT CAGTGAGATC
CTGTCTGAGA TTAAACGCGA TAGCAGTATC CGTGGCCTAG TGCTGATTTC GGGTAAAAAA
GACTCCTTCG TAGCTGGGGC GGATATTTCT ATGCTCGACG CTTGCCAAAC GGCGGGCGAT
GCGAAAGCCT TATCCCAGCA AGGGCATGTG GTGTTTAACG AGTTAGAAGC CTTGAATATC
CCTGTGGTTG CCGCGATACA TGGCGCCTGT TTAGGGGGCG GTCTTGAGCT TGCGCTTGCC
TGCCATCAAC GTGTGTGCAG TGATGACGGC AAGACCATGT TGGGCGTACC CGAAGTGCAA
CTCGGTTTGT TACCCGGTGG CGGCGGTACT CAGCGTTTGC CTCGTTTAGT GGGGATCACT
ACTGCGCTGG ATATGATGTT GACGGGTAAA CAAATTCGTC CTAAACAAGC GTTAAAGATG
GGCTTAGTTA ACGATGTGGT GCCACAGACA ATTTTACTGC AAACCGCAGT GGAGATGGCG
CTCGCGGGTA AGCGCACGGC GAAACCAGTT AAAAAATCTC TGGTTAATCA ATTACTCGAA
GGCACAGGGT TTGGTCGTAA CATTATTTTC GATCAAGCTG CCAAGCAAGT CGTTAAGAAA
ACCCAAGGTA ACTATCCTGC ACCAGCAAAA ATTATTGATT GCGTGCGCCA AGGTATGGCG
AAGGGAATGC AGAAAGGGCT TGAGGTGGAA GCCAGCCATT TTGCTGAGCT GGTGGTGTCG
AAAGAATCTG AGGCGCTGCG CAGTATTTTC TTTGCCACTA CAGAGATGAA GAAAGAAACT
GGCGCCGAAG GGGCGACACC ACGTAAAGTC AAAAAAGCCG TGATCTTAGG TGGCGGTTTG
ATGGGCGGTG GTATTGCTTC GGTCACGACG ACTAAGGCGA AAATTCCTGC GCGGGTAAAA
GACATTAACG AAAAGGGCTT AAGCAATGCG CTTTCTTACG CCTATAAGTT ATTGGATAAA
GGCGTTAAAC GTCGTCATAT GACGCCGGCC GTTCGCGACA ATTTAATGGC ACTGATGACA
ACGACGACCG AATATAAAGG CGTTAAGGAC GCTGATATTG TTGTTGAAGC CGTATTTGAG
GATTTAGCGC TTAAACATCA GATGGTTAAA GATATTGAGC GTGAATGCGG CGAGCACACG
ATTTTTGCAT CTAACACCTC ATCTTTACCC ATTGGCCAAA TTGCACAGGC GGCCAGCCGT
CCTGAAAATG TGATTGGCTT ACATTATTTC TCACCAGTAG AAAAAATGCC GCTGGTGGAA
GTGATTGCCC ATGCGAAAAC GTCTCCTGAG ACGATTGCCA CCACAGTGGC CTTTGCCCGC
AAACAGGGTA AAACGCCAAT CGTGGTACAA GACGGTGCCG GTTTTTATGT TAACCGTATC
CTCGCGCTGT ATATGAACGA AGCTGCACAA TTACTGCTGG AAGGCCAGAG TATTGAGCAC
TTAGACAAAG CCTTAGTGAA GTTCGGTTTC CCCGTTGGCC CTATCACTTT GCTCGATGAA
GTGGGTATCG ATGTCGGTGC TAAAATCGCT CCAATCCTTG AAAAAGAACT GGGCGAGCGC
TTTAAAGCCC CAGCAGCCTT CGATAAGTTA CTGAGCGATG ATAGAAAAGG CCGTAAAAAT
GGCAAAGGTT TCTATCAATA TGCTGCTGGC AATAAAGCGT CGAGCAAGAA GAAAGCCGTG
GATGAAAGTG TTTACGCAGT ACTTGGCATC AAGCCAGGTA TGGACAAAGA CTTAAGTGCT
GTGGCCGAGC GTTGTGTGGT GCAAATGCTC AATGAAGCAG TACGTTGTTT AGATGACGGC
ATTATTGCTT CCCCGCGTGA TGGTGATATT GGCGCCATTT TCGGTATTGG TTTCCCACCA
TTCTTAGGTG GCCCATTCCA CTATATTGAT ACCCTAGGTG CCGATAACTT GGTCAACATA
CTGGAACGTT ATCAAGCTCA ATACGGCGAC CGATTTGAGC CATGCCCACG TCTTAAGGCG
ATGGCGGCAG AAAAGGCTCG TTTCTTCTAA
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| Protein sequence | MEKTFNLTRR EDGIAILMMD VPGETMNTLK AEFGPEISEI LSEIKRDSSI RGLVLISGKK
DSFVAGADIS MLDACQTAGD AKALSQQGHV VFNELEALNI PVVAAIHGAC LGGGLELALA
CHQRVCSDDG KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDMMLTGK QIRPKQALKM
GLVNDVVPQT ILLQTAVEMA LAGKRTAKPV KKSLVNQLLE GTGFGRNIIF DQAAKQVVKK
TQGNYPAPAK IIDCVRQGMA KGMQKGLEVE ASHFAELVVS KESEALRSIF FATTEMKKET
GAEGATPRKV KKAVILGGGL MGGGIASVTT TKAKIPARVK DINEKGLSNA LSYAYKLLDK
GVKRRHMTPA VRDNLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT
IFASNTSSLP IGQIAQAASR PENVIGLHYF SPVEKMPLVE VIAHAKTSPE TIATTVAFAR
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSIEH LDKALVKFGF PVGPITLLDE
VGIDVGAKIA PILEKELGER FKAPAAFDKL LSDDRKGRKN GKGFYQYAAG NKASSKKKAV
DESVYAVLGI KPGMDKDLSA VAERCVVQML NEAVRCLDDG IIASPRDGDI GAIFGIGFPP
FLGGPFHYID TLGADNLVNI LERYQAQYGD RFEPCPRLKA MAAEKARFF
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