| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0284 |
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| Symbol | |
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| ID | 4479192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 317636 |
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| End bp | 318325 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639724816 |
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| Product | pseudouridine synthase Rlu family protein |
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| Protein accession | YP_867933 |
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| Protein GI | 117918741 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000244017 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000309962 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACCGAA TCATAGCCGA TGAGGCTGAT TTTCTTGTTA TTTCTAAATC GCCGAATGTG
CATTTTCACA GCCAAGATGG CACTGCGGGT GTCGTGGCGC AGCTGGAGCA GGATTTAGGG
ATAAAACTCT TTGCCGTGCA TCGGCTCGAT ACGCCCACCT CAGGGCTGTT ACTGTTAGCC
AAACATCCGG CGGCGGCTCG GCAGTTGACT GAGCTGTTTA GCGCCCATAG AGTGCAGAAA
TACTATCTTG CGCTCGCCAA AGGCAAGCCG AAAAAGAAGC AAGGCTGGGT GATTGGCGAT
ATGGCCAAAT CCCGCCGCAG CATGTTTAAG TTGCTTAGAA CCAAAGAAAA TCCTGCGATA
ACCCAATTCT TCTCCACCAG TGTTGGCGAA GGGCTTAGGC TTTATTTACT CAAACCCCTC
TCGGGGAAAA CCCATCAGTT ACGGGTCGCG CTTGCTAGCC TTGGGGTGCC GATTTTAGGC
GATGCCCTAT ATGGCTCAGA TGTCGCCGAC CGCTGTTATC TGCACGCCTA TTGTCTGCAT
TTTCGCTATC AACATGAGGA GGGTCACTGG CAGGATTATG TGTATCTCGA TACGCCTGAG
CAGGGTGAGG CGTTTGCAGA GGAGACGGTA ACCGCGGCAT TGGCTGCGTG GCGTGAGCCA
GACTCGCTCG ACTGGCCTTC TAAGGATTAG
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| Protein sequence | MYRIIADEAD FLVISKSPNV HFHSQDGTAG VVAQLEQDLG IKLFAVHRLD TPTSGLLLLA
KHPAAARQLT ELFSAHRVQK YYLALAKGKP KKKQGWVIGD MAKSRRSMFK LLRTKENPAI
TQFFSTSVGE GLRLYLLKPL SGKTHQLRVA LASLGVPILG DALYGSDVAD RCYLHAYCLH
FRYQHEEGHW QDYVYLDTPE QGEAFAEETV TAALAAWREP DSLDWPSKD
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