Gene Shewana3_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0079 
Symbol 
ID4478015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp91041 
End bp92351 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content52% 
IMG OID639724599 
Producthypothetical protein 
Protein accessionYP_867730 
Protein GI117918538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00295361 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCCG CGAAACCCAT AGCAGAATCA ACGACCCGCA TCGGTACTAG CCATTCGCTC 
AATCCTTTTA ACGGTATGTT GCGCCTATGG TTTTTTGATG TGGGCAGCGT GAGTTTTATA
GGCACTGGCA TATTTGGCTT GGCCCTGAGC GTGTTAGCGG GATGGGCGGG GCAAAAGGCG
AGTTTCGATA TTTTTGTCAC TATGGGCCTA GTGTCTACCT CGGCAGCGGT GGCATGGCAG
CTGATCCGCC TGATGGCGAG TGAGTGCTCC ATCTTAATCC CCCGTTATCG GCAGAATATT
TTTATCCAGT GTGAAGTGAT GCTGATAGGC GCCTTTAGCC TTGCGGTGTT GCAATGCGTG
CTGTTTGACC TGACCGATAC TCTGTCGTTA CTGGTCTTTG CCCAAGGGAT AAGCCTAGGG
TTTATCTTGC TGTGCCTGCG GCAAACCCAA TGGTTTTACA GCTCATTTTT ACTGTTTATC
TTAGTGCCGT TTTCCAACGA GTTGGCGGAG CAAGTGCCGC TGTGGCTAAG CATCATAGTG
CTGTTTGTGT TAGCGGCCTT AATTTGGCGC CGATGCTTAG TGTTACCTTG GCGGGTAGAG
GCACGAAGTG TGTATCTTAA CGGCTTGGAA ATGGGCTGGT TTTGGCTGCC TAGCCTGCAA
TCCATACGGA TATTGACTCG GTTAGAGCGT TATCTGCATC CGGTTAACTT CTTTATCGGT
CCTATGCTGA CCGTGTTGCT GCTGTTGCTC CCCGTGCTAA CCATCGGGCT TGGGATCGTC
TCCCACGAGC TGCATTGGAA CTTCCCGGTA TTACTGCTAC TGGCACAATT TAGTGTGATT
AGTTGCTCGT TGGTGCATTG GAGCCGTGTA CAACGCTCTC GGGCGACTGA AATGCTGCTG
TTGATGCCAA GCTTCGACGG CCGTGCTGGC TTAGTTAAGG CCTTTGGTCG TGGTCAACAA
CGCTTGCTGC TTCTGCTCAG TTTGAGCGTG TTAATCTGCA GTCTGTTTGT CACTTGGCTC
GATGGTGATT TGAGCTTGCC TCTGCTGGCG CACATAGTGA TGAGCACGTA TTGGGCCTGC
GCCTTAGTGT TAGGGCTAGG TTGTTTGTGT CGCCGCGTAT TGCAGGTGAG CCTGACCATG
CTGGTGGTGC TCGGGCATTC GCTCTGGGTG TCTATTAGCC TCGCGGCGCT GCAACACGAT
GGAAGTCTGC TCTATTGGTC GCTGGGTAAT CTGGTGCTGC TGATCCTTGG GCAAATCGCA
CTGATTTGGG GCAGTAAAAA GCTCTGGCAG GGCGACATTA CCGGGCTCTA A
 
Protein sequence
MSAAKPIAES TTRIGTSHSL NPFNGMLRLW FFDVGSVSFI GTGIFGLALS VLAGWAGQKA 
SFDIFVTMGL VSTSAAVAWQ LIRLMASECS ILIPRYRQNI FIQCEVMLIG AFSLAVLQCV
LFDLTDTLSL LVFAQGISLG FILLCLRQTQ WFYSSFLLFI LVPFSNELAE QVPLWLSIIV
LFVLAALIWR RCLVLPWRVE ARSVYLNGLE MGWFWLPSLQ SIRILTRLER YLHPVNFFIG
PMLTVLLLLL PVLTIGLGIV SHELHWNFPV LLLLAQFSVI SCSLVHWSRV QRSRATEMLL
LMPSFDGRAG LVKAFGRGQQ RLLLLLSLSV LICSLFVTWL DGDLSLPLLA HIVMSTYWAC
ALVLGLGCLC RRVLQVSLTM LVVLGHSLWV SISLAALQHD GSLLYWSLGN LVLLILGQIA
LIWGSKKLWQ GDITGL