| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3785 |
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| Symbol | |
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| ID | 4924176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4503475 |
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| End bp | 4504482 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165411 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001095910 |
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| Protein GI | 127514713 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA TCATGATACT GGCGGCGGGC AATGTGGTGG CCGGTGGCAT AGTAGGGCTG
ATCGATGTGT TCAGCTTTAC CAATGCCCTC TATCGCAGGC TGCATCCCGA GGCGACCCAA
GATCTGTTTC ACTGCCATAT CGTCTCAGGC GACGGCCAGG CGATCACCAC CAATCAAGGT
TTTCAGCTCG CGGCCACGGG GCTAAGCGAA GCGGCGCAGC TAGAGGCGGC CGATGCCGTG
GTGCTGGCCT CTTCCTTCGT GACTAATAAG GCGGAGTTTA AGGAATACTC CCAGGGCTTT
GCGCCCCTGC TTGGGCCGTT AAAAGCTTAT GCCGAGACTG GCAAGCCCAT CGCCGCCTAC
TGCTCGGGTA CCCTGATGCT GGCGGCCTCT GGGCTGCTGG ACAACAGGCG GGCCACCACT
GTCTGGTGGC TGTCGCAGAT GTTTGAGCGT AACTTCGCTA GGGTAAATCT CTGTATGGAC
TCTTTGGTGG TGTCAGATGG TCAGTTTCAC ACCGCCGGGG CGACCACCTC TAACCTGAGT
CTGGCCCTGC ATTTGGTGGG CTTGCTGGCG GGTGAGGCGC TGGCGCAGCA GATGGCTAAG
ATTCTGCTTA TAGATCCTAA CCGCATCTCC CAGCAGCCCT TCATGACCAT GGCGATCACC
CCTGAGCAGC ATCAAGATGA GGTGGTGAGC AAGATTCAGC AGTGGATGCA GTCCAATCTA
GATCAAAACT GGTTGCTCGA TGAGATAGCG CAGAAATTTG CCTTGGGTAA GCGCACCCTG
ATCCGCCGCT TCAAGAAGGC CCTCAACGAG ACGCCCGCCA GCTACATGCA GCGTCTGCGG
GTCGATGAGG CCAAGCGGCT GCTGGAGACC ACTGAGTTGG CGCTGGAGCA GATTGTCGAG
CGGGTCGGCT ATGAAGATGT CAGCTCCTTT CGTAAGCTGT TCATTCAGTT GACCAGCCTG
TCGCCAAGAG CCTATCGGCA AAAATTTAAT ACCCACAGCT GCTGTTGA
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| Protein sequence | MKTIMILAAG NVVAGGIVGL IDVFSFTNAL YRRLHPEATQ DLFHCHIVSG DGQAITTNQG
FQLAATGLSE AAQLEAADAV VLASSFVTNK AEFKEYSQGF APLLGPLKAY AETGKPIAAY
CSGTLMLAAS GLLDNRRATT VWWLSQMFER NFARVNLCMD SLVVSDGQFH TAGATTSNLS
LALHLVGLLA GEALAQQMAK ILLIDPNRIS QQPFMTMAIT PEQHQDEVVS KIQQWMQSNL
DQNWLLDEIA QKFALGKRTL IRRFKKALNE TPASYMQRLR VDEAKRLLET TELALEQIVE
RVGYEDVSSF RKLFIQLTSL SPRAYRQKFN THSCC
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