| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3452 |
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| Symbol | murC |
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| ID | 4923377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4133744 |
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| End bp | 4135198 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165074 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_001095577 |
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| Protein GI | 127514380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000273756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAAAA CCGAAGAGAA GTACGCCCAA TTAAGAACCA TCATTCCAGA GATGCGTCGC
GTTAAGCGGA TCCACTTTGT GGGGATCGGC GGCGCGGGTA TGGGCGGTAT TGCCGAGGTC
TTGGTAAACG AAGGTTATCG TCTTAGCGGT TCCGACATCG CCGAGAATGC CGTGACGGCG
CGCCTGAAGC GCCTTGGCGC GGCGATCTTC ATCGGTCACA GCGCCGATCA GGTCGAGGGC
GCCGATGTGG TGGTGGTCTC GACGGCCATC GATGCCAGTA ACCCAGAGAT TTTAGCGGCC
CAGGAGCGAC GCATCCCCAT CGTTCGCCGG GCAGAGATGT TGGCCGAGCT GATGCGTTAT
CGCCACGGTG TGGCGGTGGC CGGTACCCAT GGCAAGACGA CCACTACCAG CCTGATCGCC
AGCGTCTATG GTCAGGCCGA GCGGGATCCG ACCTTCGTGA TCGGCGGCCT GCTGAACAGT
GCCGGCACCA ATGCCCGTTT GGGTAAGAGC CGTTACCTGA TCGCCGAGGC CGATGAGAGC
GATGCCAGCT TCCTGCATCT GCAACCCATG GTGAGTGTGG TCACCAACAT CGAAGCCGAC
CACATGGATA CCTATGAGGG AGATTTCGAG AAGCTGAAAT CCACCTTCGT CGATTTCCTG
CATAACCTGC CGTTCTACGG CGTGGCCGTG GCCTGTATCG ACGATCCCGT GGTGAGAGAG
ATACTGCCCC GCATCGGCCG TAAGGTAGTG ACCTATGGTT TTAGCGAAGA TGCCGACGTG
CAGGCGCTTA ACTTCGAGCA GCAGGGTTAT AGCTCACGCT TTACCGTGCG CCGTGAAGGG
ATGGCAGATC TGGACCTGAG GGTTAATCTG CCGGGTCGTC ACAATGTGCT CAATGCCCTG
GCGGCCATAG CCGTGGCCAC AGAAGATGAG ATTGAAGATG AGGCGATCAT CCGCGCACTG
GATGAGTTCC AGGGCATAGG TCGTCGCTTC CAGCAGCTGG GTGAGTTCAC TACCACAGCT
GGCGAGGTGA TGCTGGTCGA TGACTATGGT CATCACCCCA GCGAGGTGGC GGCAACCATC
AAGGCGGCGC GTTCCGGCTG GCCGGATAAG CGTCTGGTGA TGATCTATCA GCCACACAGA
TATAGCCGCA CCCGGGATCT CTATGACGAT TTCGTCGAGG TGCTGGCTCA GGTGGACTGC
CTGTTACTGC TCGATGTTTA TAGCGCCGGA GAGGCGCCAG TACCCGGTGC AGACAGCCGC
GCCCTGTGCC GCTCGATTCG TCAGCGTGGC CAGCTAGATC CTATCTTCGT GGCCGAGCCC
GAGCAGTTAC AGACGATATT GCCTGGGGTG TTGCAGGGGG GCGATCTGCT GCTGACCCAA
GGGGCAGGCA ATATCGGCGC CCTGAGTCGT CAGCTGGCCG ATGCCGGTCT GCAGTTTGAG
TCGGAAAACC AATGA
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| Protein sequence | MIKTEEKYAQ LRTIIPEMRR VKRIHFVGIG GAGMGGIAEV LVNEGYRLSG SDIAENAVTA
RLKRLGAAIF IGHSADQVEG ADVVVVSTAI DASNPEILAA QERRIPIVRR AEMLAELMRY
RHGVAVAGTH GKTTTTSLIA SVYGQAERDP TFVIGGLLNS AGTNARLGKS RYLIAEADES
DASFLHLQPM VSVVTNIEAD HMDTYEGDFE KLKSTFVDFL HNLPFYGVAV ACIDDPVVRE
ILPRIGRKVV TYGFSEDADV QALNFEQQGY SSRFTVRREG MADLDLRVNL PGRHNVLNAL
AAIAVATEDE IEDEAIIRAL DEFQGIGRRF QQLGEFTTTA GEVMLVDDYG HHPSEVAATI
KAARSGWPDK RLVMIYQPHR YSRTRDLYDD FVEVLAQVDC LLLLDVYSAG EAPVPGADSR
ALCRSIRQRG QLDPIFVAEP EQLQTILPGV LQGGDLLLTQ GAGNIGALSR QLADAGLQFE
SENQ
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