Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1937 |
Symbol | |
ID | 4921471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2237876 |
End bp | 2239003 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640163506 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_001094062 |
Protein GI | 127512865 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.568911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0124059 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATCA GTGCCAATTT TGACGGCGGT AATATTGAGG TCATCAACCA AGATGATATC AATAATGTGC AACTGGCCAT TAGACCCGAT GAAGGGGGCG AGTTTTTCCA GTGGTTCAAT TTTCGTCTGC AAGGTGAAGT AGGCCAGCGC TATACCCTAA ATATCATCAA CGCGGGCCAA GCCTCTTACA CTAAGGGCTG GGAAGACTAT CAGGCCGCGG CCACCTACGA CAGGCAGCAA TGGTTCCGCC TGCCGACCCA GTATCAAGAT GGCAAACTTA CCATAGAGGT CGAGCTGGAT TGCGAGATGA TCCAAATCGC CTATTTCGCA CCCTATAGCT ACGAGCGTCA TCAGGATCTG CTTAGCGCCG TTCAGGTGCA TCCACTCGTC TCACTCGAGC ATCTGGGTAA AACCTTAGAC GATCGCGACA TGACCCTGGT TAAGGTGGGT GATGAAGATG AAGAGAAAGC TAAGATCTGG ATCACCGCAC GTCAACATCC GGGTGAAACC ATGGCCGAGT GGCTGGTGGA AGGCCTGCTA AATAATCTTC TCGATGGCGA TTGTCCGACG GCCAAGGCGC TGCTGGATAA GGCCAACTTC TATATCGTAC CTAACATGAA CCCGGATGGC GGCGTACGTG GCCACCTGAG AACCAATGCT AAAGGCGTTA ACCTAAACCG CGAATGGCAG AGTCCGTCGC TGGAGAAGAG CCCAGAGGTG TATCATGTGG TCAATCGCAT GAAAGAGACT GGCGTCGATC TCTACTACGA TGTGCATGGC GATGAAGGCC TGCCATATGT GTTCCTCGCA GGCTGTGAAG GCGTGCCGGG TTACAATCAA AAGATGGCGG ATCTGCAGGG CGATTTCGTT AAGGCATTGC TGATGGCCAG TGCCGATTTC CAAGATGAGT TCGGTTATGA TAAAGACGAG CCAGGCCAGG CCAACCTGAC CGTTGCGTCA AACTGGGTGG CGCAGACCTT CGGCTGTCTC TCTAACACCC TGGAGATGCC ATTTAAAGAT AATGCCAACA TGCCAGATCC TATGTCTGGT TGGTCGCCTG AGCGTTGCAT CTACCTGGGT GAGGCGTCAC TGCTCGCCAT GCTGGCCGTG GTCGATAAGC TAAGATAG
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Protein sequence | MLISANFDGG NIEVINQDDI NNVQLAIRPD EGGEFFQWFN FRLQGEVGQR YTLNIINAGQ ASYTKGWEDY QAAATYDRQQ WFRLPTQYQD GKLTIEVELD CEMIQIAYFA PYSYERHQDL LSAVQVHPLV SLEHLGKTLD DRDMTLVKVG DEDEEKAKIW ITARQHPGET MAEWLVEGLL NNLLDGDCPT AKALLDKANF YIVPNMNPDG GVRGHLRTNA KGVNLNREWQ SPSLEKSPEV YHVVNRMKET GVDLYYDVHG DEGLPYVFLA GCEGVPGYNQ KMADLQGDFV KALLMASADF QDEFGYDKDE PGQANLTVAS NWVAQTFGCL SNTLEMPFKD NANMPDPMSG WSPERCIYLG EASLLAMLAV VDKLR
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