| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1729 |
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| Symbol | |
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| ID | 4923469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1981396 |
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| End bp | 1982244 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640163291 |
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| Product | curli production assembly/transport component CsgG |
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| Protein accession | YP_001093855 |
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| Protein GI | 127512658 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1462] Uncharacterized protein involved in formation of curli polymers |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.214664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTT TGTTGATGGC CGCTGGCCTG TTATTTCTCT CGGCCTGTTC TAGCACCAAT
GAACTTGAAC AGGTGCAAGC CTCTTCGAGT CTGATGCCCA AGGGCGAGAG CTACTATGAT
CTCATTAATC TGCCTGCGCC CCAGGGGGTG ATGCTGGCCG CCGTGTATGA TTTTCGCGAT
CAGACAGGTC AATATAAGCC AATTCCGTCG AGTAACTTTT CTACCGCCGT GCCCCAGAGT
GGCACCGCTT TTCTCGCTCA GGCATTGAAT GATTCCAGTT GGTTTATTCC CGTCGAGCGC
GAGGGGCTGC AGAATCTACT TACCGAACGT AAGATTGTCA GGGCCGGGCT TAACGGTGAT
GCCAACAAGC TGCCTCAGCT GAACTCGGCG CAGATCCTGA TGGAAGGAGG CATAGTTGCC
TATGACACCA ATGTCAGAAC CGGTGGCGCG GGGGCCCGCT ACCTGGGCAT AGGCGCGGCA
ACTCAGTTTC GTGTCGATAC TGTGACAGTC AACCTGAGGG CGGTTGATAT TCGCACCGGC
CGATTATTGA GTAGCGTGAC CACCACTAAG TCTATCTTGT CCAAAGAGAT CACCGCCGGG
GTGTTTAAGT TTATCGATGC CCAGGAGCTG CTTGAGTCTG AGCTTGGCTA TACCTCAAAC
GAGCCTGTGA GTCTGTGTGT GGCATCGGCC ATCGAAAGTG CGGTGGTGCA TATGATTGCC
GATGGGATCT GGAAAGGTGC TTGGAATTTA GCCGATCAGC CCAGTGGTCT GCGCAGTCCA
GTGTTACAAA AATATTGGTT AGAAGCGCAT TCCGAGGCCA GGGTGCGAGC AAAAATCAAT
CAAAGCTGA
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| Protein sequence | MKPLLMAAGL LFLSACSSTN ELEQVQASSS LMPKGESYYD LINLPAPQGV MLAAVYDFRD
QTGQYKPIPS SNFSTAVPQS GTAFLAQALN DSSWFIPVER EGLQNLLTER KIVRAGLNGD
ANKLPQLNSA QILMEGGIVA YDTNVRTGGA GARYLGIGAA TQFRVDTVTV NLRAVDIRTG
RLLSSVTTTK SILSKEITAG VFKFIDAQEL LESELGYTSN EPVSLCVASA IESAVVHMIA
DGIWKGAWNL ADQPSGLRSP VLQKYWLEAH SEARVRAKIN QS
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