| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1549 |
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| Symbol | |
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| ID | 4921835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1777401 |
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| End bp | 1779770 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640163111 |
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| Product | phosphoenolpyruvate synthase |
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| Protein accession | YP_001093675 |
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| Protein GI | 127512478 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01418] phosphoenolpyruvate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0036639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCAAT ATGTACTCTG GTATCAAGAA TTAGGCATGG GTGACGTCAA CAAGGTAGGC
GGTAAAAATG CCTCTCTTGG GGAGATGATC AGCAATCTAG CTAATGCAGG TGTTCAAGTG
CCTGGTGGCT TTGCGACCAC TTCCTTTGCG TTCAATGAAT TTCTTGAACA AAGCGGACTT
AACCAGAAGA TATACGAGAC GCTAGAAGCT CTAGACGTCG ACGACGTGAA TGCACTCGCC
ACCGCAGGTG CACAGATCCG ACAGTGGGTT ATCGATACCC CATTCCATAG CGAATTTGAG
CAGGTTGTAC GTGAGTCGTA CGACAAGCTT TCCTCAGAAA CTAAGGATGC ATCGTTCGCA
GTACGCTCTT CAGCGACTGC TGAAGATATG CCAGATGCTT CATTTGCCGG CCAACAGGAA
ACCTTCCTGA ACGTTAAAGG CTTCGACGCA GTACTGGTTG CTATCAAGCA CGTATTCGCC
TCTCTCTTTA ACGACCGAGC TATCTCATAC CGTGTACACC AAGGTTATGA CCACAAAGGC
GTTGCGCTTT CAGCTGGCGT ACAGCGTATG GTTCGTTCAG ACACCGCCGC TTCAGGTGTA
ATGTTCACCA TGGATACTGA GTCAGGTAAC AACGATGTGG TCTTCGTGAC CTCTTCATTC
GGCCTAGGTG AGATGGTAGT ACAAGGCGCG GTGAACCCAG ATGAGTTCTA TGTTCACAAG
CCAAGCCTGA CCGCAGGTCA CAAGGCCGTT GTTCGCCGCA ACATCGGTAG CAAGTTGATT
CAGATGGTTT ACTCTGACGA CCTGAGCCAC GGTAAGCAGG TGAAGATTGA AGATGTACCT
GCCGACATGC GTCGTCAGTT CTCTATCAGC GATGAAGAGG TGATGGAGCT GGCTAAGCAA
GCCATGATCA TCGAGAAGCA CTACGGTCGT CCAATGGACA TCGAGTGGGC TAAAGATGGT
AACGACGGCA AACTGTATAT CGTACAGGCG CGTCCAGAAA CCGTACGTTC ACGTGAAGAT
GTACAGCTGA TCGAACGTTT CCACCTGAAG ACCAAGAGCG AAGTGATTGG CGAAGGTCGT
GCCATCGGTC ATAAGATCGG TAACGGTACC GCTAAGGTAC TGGCTTCTAT CGAAGATATG
GACCAGATCC AAGAAGGTGA CGTACTGGTT ACCGACATGA CTGACCCAGA TTGGGAGCCA
ATCATGAAGC GCGCCAGCGC TATCGTCACC AACCGTGGTG GCCGTACTTG TCACGCGGCG
ATCATCGCCC GTGAACTCGG CGTGCCGGCG GTAGTAGGTT GTGGCGACAT CACAGACAAG
ATCAAGCATG GTCAACAGGT GACTGTTTCT TGTGCCGAAG GTGACACAGG TTACATCTAC
GAAGGTATCC AAGAGTTTGA CGTTATGTCT TCTCGCGTCG ATTCTATGCC TGAACTACCG
ATGAAGATCA TGATGAACGT GGGTAACCCA GACAGAGCGT TCGACTTCGC TCGTCTGCCT
AACGAAGGTG TGGGTCTGGC CCGTCTCGAG TTCATCATCA ACCGTATGAT CGGTATTCAC
CCTAAGGCGC TGCTTGAGTT CAACGACCAA AGCGCCGAGC TGCAGCAAGA GATCCACGAG
ATGATCGCCG GCTACGAGTC ACCAGTAGAA TACTACGTGG CACGTCTGGT TGAAGGTATC
GCGACTATCG CATCGGCCTT CCATCCGAAG AAAGTTATCG TACGTATGTC AGACTTCAAG
TCTAACGAGT ACGCTAATCT GGTTGGTGGT GACCGTTACG AGCCGGAAGA AGAGAACCCA
ATGCTGGGCT TCCGCGGTGC AAGCCGTTAC ATCTCTGAGT CGTTCCGCGA CTGTTTCGCC
CTTGAGTGCG AAGCCATCAA GCGTGTACGC AACGAGATGG GTCTGACGAA TGTAGAGATC
ATGATCCCAT TCGTACGTAC GCTTGAAGAA GGCCGTCAGG TTATCGAACT GCTGAAAGAG
CAAGGCTTGG AGCGTGGTAA AGATGGTCTG CGCGTCATCA TGATGTGTGA GCTGCCTTCT
AACGCCCTGC TAGCCGACCA GTTCCTCGAG ATCTTCGATG GTTTCTCAAT CGGTTCGAAC
GACTTGACCC AGCTAACCCT AGGTCTGGAC CGTGACTCAG GCATCATCAG TCACCTGTTC
GACGAGCGTA ACGAAGCCGT TAAAGCCCTG CTGGCAATGG CTATCAAGGC CGCTAAGGCG
AAAGGCGCTT ACGTGGGTAT CTGTGGTCAA GGTCCTTCTG ACCACGCCGA CTTTGCGGCT
TGGTTGGTAG AGCAAGGCAT CGACACTGTA TCGCTTAACC CAGATACAGT GATCGATACC
TGGTTATACC TGGGTGAAGC TCACGCTTAA
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| Protein sequence | MQQYVLWYQE LGMGDVNKVG GKNASLGEMI SNLANAGVQV PGGFATTSFA FNEFLEQSGL
NQKIYETLEA LDVDDVNALA TAGAQIRQWV IDTPFHSEFE QVVRESYDKL SSETKDASFA
VRSSATAEDM PDASFAGQQE TFLNVKGFDA VLVAIKHVFA SLFNDRAISY RVHQGYDHKG
VALSAGVQRM VRSDTAASGV MFTMDTESGN NDVVFVTSSF GLGEMVVQGA VNPDEFYVHK
PSLTAGHKAV VRRNIGSKLI QMVYSDDLSH GKQVKIEDVP ADMRRQFSIS DEEVMELAKQ
AMIIEKHYGR PMDIEWAKDG NDGKLYIVQA RPETVRSRED VQLIERFHLK TKSEVIGEGR
AIGHKIGNGT AKVLASIEDM DQIQEGDVLV TDMTDPDWEP IMKRASAIVT NRGGRTCHAA
IIARELGVPA VVGCGDITDK IKHGQQVTVS CAEGDTGYIY EGIQEFDVMS SRVDSMPELP
MKIMMNVGNP DRAFDFARLP NEGVGLARLE FIINRMIGIH PKALLEFNDQ SAELQQEIHE
MIAGYESPVE YYVARLVEGI ATIASAFHPK KVIVRMSDFK SNEYANLVGG DRYEPEEENP
MLGFRGASRY ISESFRDCFA LECEAIKRVR NEMGLTNVEI MIPFVRTLEE GRQVIELLKE
QGLERGKDGL RVIMMCELPS NALLADQFLE IFDGFSIGSN DLTQLTLGLD RDSGIISHLF
DERNEAVKAL LAMAIKAAKA KGAYVGICGQ GPSDHADFAA WLVEQGIDTV SLNPDTVIDT
WLYLGEAHA
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