Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_1416 |
Symbol | |
ID | 4922709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 1629679 |
End bp | 1630746 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640162956 |
Product | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
Protein accession | YP_001093543 |
Protein GI | 127512346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0070531 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTTTT ATTTGATTTT TGCATTTTTT AGTTCGTTTA TTTTGTTACT TGTATGTCGT AAATTAGCTA AAAGAATTGG CTTGGTCGAC AAACCTAATG AGCGTAAGTT ACATGTAGGT CAAGTGCCAT TAATTGGTGG TATTTCAATC TTCACTGCTA TCATGCTGAA CATCTGTTTG GTGTTCGATG TCACGAGTAA TGTGATGCTT TACATGGTTT GCTCCACAGT ACTGATTGTA CTAGGTGCGC TTGATGATCG TTTTGATCTC AGCTTTAAAG CTCGTTTGGG GGTGCAGGCA GCGATTTCGA TGGCGATGAT TTTGATCGGT TATAAGAGTC TATATTACTT AGGCTTTATT GCTGGTGATA AGGCGTTGAT CCTACCGACC TTTGTCAGTT ATGTCGTGAC CATTTTTGCC GTGATCGGAG CCATTAACGC CTTTAATATG GTTGATGGTA TTGACGGTTT GTTGGGTGGA TTAGCCTTGG TGACCTTTGG TGCACTTGGT TATATGTTTT ACGGTGCAGG GCAGATAGAG TTGGCACACT TTTGTTTACT GCTCATGGTG GCGATGCTGC CTTATATCAT GCTTAATTTA GGCTTTCCTT TTGGGCGTCG TTTTAAAGTG TTTATGGGTG ATGCTGGTAG TATGTTTATT GGCTTTACCG TCATTTGGTT GTTGATTGAG GCGAGTCAGG ATCAGCAAGA GGCGGTCATT CGTCCGGTGA CGGCTTTGTG GTTTATCGGG TTGCCGTTAA TGGATATGGT GTGCATCATG TCGCGCCGCA TCAAAAAGGG TCAATCACCA TTTAAGCCCG ATAGAGAGCA TTTACACCAT ATCTGCCAAC GCGTTGGAAT GTCGCCGAGA ATGTCATTGT TGGTCATCTG TTTGATAGCG ACCTTGATGG CGGTAGTTGG GGTTTGGTCT GAGTATCTCG AGATTAGTGA AACTGTGATG TTTGTCGCGT TTTTGCTGGT GTTTGCTTTG TACTATCTCG CGATTAGTTA TGTCTGGCGC ATAACTGCAT TCATGCATAG GTGGTTTAAG TTTACAAGAG CAACATAA
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Protein sequence | MSFYLIFAFF SSFILLLVCR KLAKRIGLVD KPNERKLHVG QVPLIGGISI FTAIMLNICL VFDVTSNVML YMVCSTVLIV LGALDDRFDL SFKARLGVQA AISMAMILIG YKSLYYLGFI AGDKALILPT FVSYVVTIFA VIGAINAFNM VDGIDGLLGG LALVTFGALG YMFYGAGQIE LAHFCLLLMV AMLPYIMLNL GFPFGRRFKV FMGDAGSMFI GFTVIWLLIE ASQDQQEAVI RPVTALWFIG LPLMDMVCIM SRRIKKGQSP FKPDREHLHH ICQRVGMSPR MSLLVICLIA TLMAVVGVWS EYLEISETVM FVAFLLVFAL YYLAISYVWR ITAFMHRWFK FTRAT
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