| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0870 |
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| Symbol | rpmA |
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| ID | 4924227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 990884 |
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| End bp | 991138 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640162403 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001093001 |
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| Protein GI | 127511804 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000545576 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GCGATTCAGA AAGCAAACGT
CTTGGTGTTA AGCGTTTCGG TGGTGAATCA GTTCTAGCTG GTAACATCAT CGTTCGTCAA
CGTGGTACTA AGTTTCACGC AGGTGTTAAC GTAGGTATCG GTCGTGACCA TACCCTATTT
GCACTAACTG ACGGTAAAGT TAAGTTCGAA GTTAAAGGTC CTAAGAACCG CAAGTTCATT
AGCATCGAAG CTTAA
|
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| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF
ALTDGKVKFE VKGPKNRKFI SIEA
|
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