| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0014 |
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| Symbol | |
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| ID | 4923044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 17578 |
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| End bp | 18018 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640161526 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092146 |
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| Protein GI | 127510949 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0124057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.43799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGTT TACAAGGCAT TAGCTACAAG GTAGTCAAAG GTGGACCCAT GCTGGAAACC
TCGGCGGCAC TCGTCACCAC CAGCACAGGG GTTGCACAAG ATGTATTTGG AAAGCCAGGT
AAACGTCAGG TCACCCTACT GTCGGCGCAG CAATGGCTCG CCGCCTGCGA GGCACTCGAT
ACCGAACTTC CCTGGACCAC CCGCAGAGCC AACTTACTCA TAGATGGCAT TAGCTTCAGC
GAAAAAGATC TCGGCAAGGT GATTCACGTA GGCGCCTTAC AACTGGAGAT CACAGGCGAA
ACCGATCCCT GTAAGAAAAT GGAGATGGCC TATGCTGGAC TCGAGGCGGC CCTGCGACCA
GACTGGCGCG GCGGCGTCAC CTGTCGCGTA CTCAACGATG CCGAGATCAG CATCGGCGAT
AGCGTACAGT TAGCCGATTA G
|
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| Protein sequence | MASLQGISYK VVKGGPMLET SAALVTTSTG VAQDVFGKPG KRQVTLLSAQ QWLAACEALD
TELPWTTRRA NLLIDGISFS EKDLGKVIHV GALQLEITGE TDPCKKMEMA YAGLEAALRP
DWRGGVTCRV LNDAEISIGD SVQLAD
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