Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3155 |
Symbol | ribH |
ID | 5373532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3764670 |
End bp | 3765149 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640831409 |
Product | 6,7-dimethyl-8-ribityllumazine synthase |
Protein accession | YP_001367349 |
Protein GI | 153001668 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0054] Riboflavin synthase beta-chain |
TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000230822 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTAG TTCAAGGTAA TATCGAAGCG AAAAATGCCA AAGTTGCGAT TGTAATTTCG CGTTTCAACA GCTTTTTAGT TGAGAGCTTG CTTGAAGGTG CACTTGACAC GCTGAAACGT TTTGGCCAAG TCAGCGACGA CAATATCACT GTTGTCCGTG TACCAGGTGC GGTTGAGTTG CCGCTAGCTG CGCGTCGCGT AGCTGCCAGT GGTAAATTCG ACGGTATTAT CGCATTAGGT GCGGTGATCC GTGGTGGTAC TCCTCATTTT GATTTTGTTG CAGGCGAATG TAATAAAGGT CTAGCTCAAG TTGCTTTAGA ATTTGATCTG CCTGTTGCTT TCGGTGTTTT GACCACAGAT ACCATTGAAC AAGCTATTGA ACGTTCAGGT ACCAAAGCGG GTAACAAAGG CGGCGAAGCT GCTTTAAGTC TGCTTGAAAT GGTCAATGTT CTGCAAGAAC TTGAACAACA GTTGTTATAG
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Protein sequence | MNVVQGNIEA KNAKVAIVIS RFNSFLVESL LEGALDTLKR FGQVSDDNIT VVRVPGAVEL PLAARRVAAS GKFDGIIALG AVIRGGTPHF DFVAGECNKG LAQVALEFDL PVAFGVLTTD TIEQAIERSG TKAGNKGGEA ALSLLEMVNV LQELEQQLL
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