| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2388 |
|---|
| Symbol | |
|---|
| ID | 5371997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2844046 |
|---|
| End bp | 2844867 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640830602 |
|---|
| Product | serine O-acetyltransferase |
|---|
| Protein accession | YP_001366589 |
|---|
| Protein GI | 153000908 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1045] Serine acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01172] serine O-acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000558111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTGA TAGCTAGGCT AAAAGAAGAC ATTGAATCTA TATATCACCG TGATCCTGCG
GCGCGCAGCG CGTTTGAGAT CTTGGTTAAC TATCCGGGCA TGCATGCCAT TTGGTTGCAT
CGTATAAGCC ATAAGCTATG GAAGCGCGAT TGGCGCTTAA CGGCACGTTG TTTATCGACT
TTTTCCCGTT GGTTGACGGG TGTAGAAATC CATCCCGGCG CCACCATAGG TCATCGATTT
TTTATCGACC ATGGCATGGG GGTGGTGATT GGTGAAACGG CTGAGATTGG TGATGATTGC
ACGCTTTATC ACGGTGTAAC GCTCGGTGGA ACCACATGGC AAGCGGGTAA ACGTCACCCG
ACGTTAGCCA ATAACGTGGT GGTGGGCGCG GGGGCAAAAA TCCTCGGTCC TATTACCATG
CACGACGGTG CGCGTGTGGG TTCAAACTCG GTTGTGGTAA AAGATGTGCC AAAAGATACC
ACCGTAGTGG GTATTCCTGG GCGCGTGGTG GCATCACCGT CACCGCAATC GAAAGAGAAA
ACTGAACGCC GTAGCGCGAT GGCTAAAAAA TACGGTTTTG ATGCATACGC AGTATCACCG
GATAATCCCG ATCCTGTTGC CAATGCGATA GGGCAGATGC TGGATCATAT GCATCTGATG
GACTCGAAAG TTCAAGAATT GTGTCAAGCC ATTCAAGGGC TGGGCGGTAA TGTCTGCACC
GAAAAACTGC CAGAGCTGGA TATGGGCGAG TTTAATGATG CAGAGAAAGC CGCCGCCGAT
AAGCGACAAA ATGCTATCGA TGAGTTTGAT CCGAGTATTT AG
|
|---|
| Protein sequence | MGVIARLKED IESIYHRDPA ARSAFEILVN YPGMHAIWLH RISHKLWKRD WRLTARCLST
FSRWLTGVEI HPGATIGHRF FIDHGMGVVI GETAEIGDDC TLYHGVTLGG TTWQAGKRHP
TLANNVVVGA GAKILGPITM HDGARVGSNS VVVKDVPKDT TVVGIPGRVV ASPSPQSKEK
TERRSAMAKK YGFDAYAVSP DNPDPVANAI GQMLDHMHLM DSKVQELCQA IQGLGGNVCT
EKLPELDMGE FNDAEKAAAD KRQNAIDEFD PSI
|
|---|
| |