| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1892 |
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| Symbol | |
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| ID | 5372913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2257638 |
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| End bp | 2258747 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640830095 |
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| Product | ribonuclease D |
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| Protein accession | YP_001366098 |
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| Protein GI | 153000417 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000212189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAGCGT TTCAATATGT GAGTGATGAA GCAAGCCTTA ATGCCCTCGT TGCCCAATAT
AAACAGAGTA AGATACTCGT GTTAGATACC GAGTTTGTTC GTACTCGTAC TTATTATGCC
AAGTTAGGTT TGATCCAAGC CTATGATGGT AAAACCTTAG CTTTGATTGA TCCTGTGGCT
TTACCTGATT TAGCCCAGTT TTGGGCGCTG TTATCGGACC CGAATATCAT TAAGTTAGTG
CATTCCTGCA GTGAAGACTT AGAAGTGTTT GCCCATTATG GTAAATGTCA GCCTACGCCT
TTGTTTGATA GCCAAATTGC AGCTTCTTTG TGTGGAATGG GCCATGGTGT AGGTTATGCC
AAGTTAGTTG AAACTTGCCT TGGTGAAGTG ATCGATAAAG GTGAGTCACG TACCGATTGG
ATCCGCCGCC CTTTAACGGA AGCACAGTTA AGCTACGCCG CGAATGACGT CTTGTACTTG
TATCAGCTCT ATCCTCAACT TGAAGCGAAA CTCAGCGCCC AAGGGCGTTT AGCTTGGTTA
TACGAGGAAG GGGAAAGGAT GACCCAGGGC AGGCTTGCCG ATCCTGATCT CGACACGGCT
TATTTGAAAG TGAAAAATGC TTTCCAACTA ACCGAAATCC AATTGGCTTA CCTTAAAGTG
CTTGCTAAGT GGCGTCTTGA AAAAGCCTTA GTGCGTGATT TAGCCCTAGG TTTTGTGGTC
AAAGATCATG GCCTTATCGC ATTAGCGAAG AAGCAACCTA AATCCTCGGC TGACTTGTTT
AAGCTCAATG ATTTGACTGA GCAAGAAAAA CGTATCCACG GCAAAGATCT ATTACGTGTG
CTGCAAACCG CTGATTTGGT CAATTTACCC GAATTAGTGG ATGTGTTGGC GTTGAAGTCG
GGCTACAAAT CGGCCTTTAA GGCGATTAAA AGCTGCTTAG TCGAGTTGTG CGAACAGCAT
GATGTGCCGC AGGAAATGCT CGGTTCTAAA CGTCATATCC ATGAGTTTTT GCAATGGCGT
TGGGATAAGC AACAAGGGGA TTTGCCCGCT GTGTTATGCG GATGGCGGGG CGAGATTGCC
GCTGAGTCCC TAGCTAAGCT TGAGGTCTAA
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| Protein sequence | MSAFQYVSDE ASLNALVAQY KQSKILVLDT EFVRTRTYYA KLGLIQAYDG KTLALIDPVA
LPDLAQFWAL LSDPNIIKLV HSCSEDLEVF AHYGKCQPTP LFDSQIAASL CGMGHGVGYA
KLVETCLGEV IDKGESRTDW IRRPLTEAQL SYAANDVLYL YQLYPQLEAK LSAQGRLAWL
YEEGERMTQG RLADPDLDTA YLKVKNAFQL TEIQLAYLKV LAKWRLEKAL VRDLALGFVV
KDHGLIALAK KQPKSSADLF KLNDLTEQEK RIHGKDLLRV LQTADLVNLP ELVDVLALKS
GYKSAFKAIK SCLVELCEQH DVPQEMLGSK RHIHEFLQWR WDKQQGDLPA VLCGWRGEIA
AESLAKLEV
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