| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1728 |
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| Symbol | |
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| ID | 5369685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2079833 |
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| End bp | 2080579 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829924 |
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| Product | UMP phosphatase |
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| Protein accession | YP_001365934 |
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| Protein GI | 153000253 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000338596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATA TTATCTGCGA TATCGATGGT GTACTACTGC ACGACAATAA ACTGATCCCT
GGCAGCGACA AATTTATCCA GCGTATTTTA GAACAAGGCA ATCCGTTAGT CGTCCTGACT
AACTATCCCG TACAAACGGG AAAGGATCTG CAAAACCGTT TAAGCGCTGC CGGTATTGAT
ATTCCTGAAG AATGCTTTTA TACCTCCGCG ATGGCAACCG CTGACTTTTT ACAGCACCAA
GAAGGCAGCA AAGCCTATGT CATTGGTGAA GGCGCCCTCA CCCACGAACT CTACAAAGCA
GGCTTTACCA TTACCGATAT CAACCCTGAC TTTGTGATTG TCGGTGAAAC CCGCTCCTAC
AATTGGGAAA TGATCCATAA AGCCGCAGCT TTTGTGGCAG GTGGCGCCCG CTTTATTGCC
ACCAACCCTG ACACTCACGG CCCAGCTTAC AGCCCTGCCT GTGGCGCCCT ATGTTCGCCA
ATCGAGCGTA TTACCGGTAA AAAACCTTTC TACGTGGGTA AACCGAGTGC TTGGATTATT
CGCTCAGCGC TAAATCATAT TGATGGGCAC TCGGAAGACA CTGTCATTAT CGGCGACAAT
ATGCGCACCG ATATTTTGGC AGGCTTCCAA GCGGGGCTTG AAACCATTCT GGTCACCAGT
GGCGTGAGTA AACTTGAAGA TATCGACAAA GAACCCTTCC GCCCGAACCA TGTGTTTGCC
TGCGCTGGCG ACATCGATGT TGTTTAA
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| Protein sequence | MKNIICDIDG VLLHDNKLIP GSDKFIQRIL EQGNPLVVLT NYPVQTGKDL QNRLSAAGID
IPEECFYTSA MATADFLQHQ EGSKAYVIGE GALTHELYKA GFTITDINPD FVIVGETRSY
NWEMIHKAAA FVAGGARFIA TNPDTHGPAY SPACGALCSP IERITGKKPF YVGKPSAWII
RSALNHIDGH SEDTVIIGDN MRTDILAGFQ AGLETILVTS GVSKLEDIDK EPFRPNHVFA
CAGDIDVV
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