Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1620 |
Symbol | |
ID | 5371150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1960992 |
End bp | 1962203 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640829820 |
Product | porin |
Protein accession | YP_001365830 |
Protein GI | 153000149 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000207941 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGA CGTTAGTAGC AACTGCGCTT GCAGCAATTT TTTTAGTACC ATCAGTCTCG GCTATCGAGA TCTATAAAGA TAATAAAAAT GCCGTAGAAA TCGGTGGTTT TATTGATGCA CGCGTGATCA ACACTCAAGG GGAAACTGAG GTTGTTAACG GCGCATCTCG CATTAATTTT GGTTTTAATC GTGAGTTGAC TGACGGTTGG AAAGCCTTTG CTAAATTAGA GTGGGGCGTA AACCCAGTTG GTAGCAGCGA TATCGTCTAT AACAATCGCT TCGAATCTGT TCAAGAAGAG TTCTTCTATA ACCGTTTAGG TTACGCAGGT CTGTCCCATG ACACTTATGG AACACTGACT ATCGGTAAGC AGTGGGGTGC TTGGTACGAT GTCGTTTACA ACACTAACTA CGGTTTTGTG TGGGACGGCA ACACTGCAGG TGTTTACACT TATAACAAAG ATGACGGCGC GGTAAACGGC GTGGGTCGTG GTGATAAAAC GGTCCAGTAT CGCAACGCCT TTGGCGATGT TAGCTTCGCA GTTCAAGCGC AGTTGAAAAA CAGCAGCTTC TATACTTGTG ATACCACCGA TGATATTACT CAAGCTCAGT GTCAAGCGAA CTGGGAAAGT GGTGATAAAG CGGCTCAACA AGTTGAGTAC AACTACACTT ATGGTGGCGC GCTGACCTAT AAAGTCACAG ATATGTTGAC TCTAACTGCG GGTGTTAACC GTGGTGAGTT TGATGTGAGT TTTGGTAACG GCGAACAAAC CACAGCGGTT GATCTTATCT ACGGTGCAGG TATCACTTGG GGTAACTTCG ATAACGATGG TTTATATGCT GCTGCAAACG TTAACAGACA AGAAAACCAT GACACTGACA ACATTGGTCG TTTGATCAAA GATGCCTATG GTATTGAAAG TTTAGTTTCT TACAAGTTTG ACAATGGCCT ACGTCCATTC ATTTCTTACA ACGTGCTTGA TGCCGGTAAA GATTATGTTA TTCAGCCTAA CTTCAATGCT GATCCTAACG ATGAATTCAA ACGTCAGTTC TTAGTTGTCG GTTTACACTT TGTATGGGAC CCAAATACAG TTCTGTACAT AGAAGCACGT AAAGATTACA GCGATTTCAC CAGCGCAGAT AAAGACCAAG AAGCCAGAAT GGCACTTTCT GAATCTGATG GCGTAGCAAT CGGTATCCGT TACACACTCT AA
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Protein sequence | MNKTLVATAL AAIFLVPSVS AIEIYKDNKN AVEIGGFIDA RVINTQGETE VVNGASRINF GFNRELTDGW KAFAKLEWGV NPVGSSDIVY NNRFESVQEE FFYNRLGYAG LSHDTYGTLT IGKQWGAWYD VVYNTNYGFV WDGNTAGVYT YNKDDGAVNG VGRGDKTVQY RNAFGDVSFA VQAQLKNSSF YTCDTTDDIT QAQCQANWES GDKAAQQVEY NYTYGGALTY KVTDMLTLTA GVNRGEFDVS FGNGEQTTAV DLIYGAGITW GNFDNDGLYA AANVNRQENH DTDNIGRLIK DAYGIESLVS YKFDNGLRPF ISYNVLDAGK DYVIQPNFNA DPNDEFKRQF LVVGLHFVWD PNTVLYIEAR KDYSDFTSAD KDQEARMALS ESDGVAIGIR YTL
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