| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1184 |
|---|
| Symbol | |
|---|
| ID | 5373494 |
|---|
| Type | |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | Yes |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1417151 |
|---|
| End bp | 1418446 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | 640744668 |
|---|
| Product | |
|---|
| Protein accession | |
|---|
| Protein GI | |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000735175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTG CAAATGAAAC TGAGGCGAGT TCGGTGAGTG AGGCAGCAAC GAGTGTGCAC
CAGAGTGGCA ACTTTAGGTT CGCTTTAGTG GCATTAACAT CGTTGTTTTT CATGTGGGGA
TTCATTACTT GTCTTAACGA TATCTTAATA CCTTATTTAA AAAACATGTT TGAGCTGAAT
TACGCCCAAG CCATGTTGGT GCAGTTTTGT TTTTTTGGGG CTTACTTTAT TGTCTCAATC
CCAGCGGGTG CACTTGTGGG TAAGATTGGT TATCAAAAAG GCATAGTCAC TGGGCTTGGT
ATTGCGTGTT TAGGCTGCTT ATTATTTTAT CCTTCAGCGA GTTTCGCTTC GTATTGGATG
TTCCTAGGCG CTTTTTTTGT TTTAGCCTCT GGCATTACCA TTCTGCAAGT GGCGGCTAAT
CCCTACGTCA GCGTGCTGGG ACCTGCAAAA ACCGCGTCAT CAAGACTCAC TCTGACCCAA
GCGTTTAATT CCTTTGGCAC CACAGTTGCC CCGTTTTTTG GTAGTTGGTT GATTTTATCG
ACTTCACATC AAATGACAGG AGAGGCTGCT CCTGACCTTG TAGTCAGCAC TGCGGCCCAA
GCGAGCACAG TACAAGTTCC CTATTTGATT TTAGCGGCCA GTTTATTTGT GCTGGCGGTG
ATTTTTATAC TGTTAAAGCT GCCTTTTTTA GGTAAAAAAC TGCCTGCGAG CAGTGCTAAA
GTGCTGGGCA GTGCATGGCA ATTTCCGCAT CTTGTTCTCG GTAGCGTGGG GATTTTTGTG
TATGTGGGGG CCGAAGTCGC CATTGGCAGT TTTTTGATTA GCTTTCTAGT TCAGCCCGAT
ATTGGCGGTT ACACTCACGC CGAAGCTGCA CATTACATTG CCTACTATTT TGGCGGCGCT
ATGGTTGGGC GTTTTATTGG CGCGGCCGTG ATGTAAAAAA TCAAGGCCGG CAAAGTGTTA
GCCTTTAATG CGATTTGTGC TTGCCTGCTG GTGGCCTTAG CCATGTTTAG TACGGGGGCT
ATGGCAATGT GGGCCTTACT GTTAGTCGGG TTATGTAACT CTATTATGTT CCCGACGATT
TTCAGCTTGG CATTACAAAA TCTTGAACAA CACACCAGCC AAGGTTCAGG CATTTTATGT
TTGGCGATTG TGGGCGGCGC GATTGTGCCC TTATTTCAAG GTATGTTAGC CGATCATTTT
GGTATCCAAT TGGCCTTTAT CTTACCGCTG CTTTGTTATG GTTTTATCGC CTATTACGGG
GCTAAGGGCT GTGATGCCCC AAGACCAAGA TTTTAA
|
|---|
| Protein sequence | |
|---|
| |