| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1111 |
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| Symbol | |
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| ID | 5373105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1320923 |
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| End bp | 1321879 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640829310 |
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| Product | transaldolase B |
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| Protein accession | YP_001365326 |
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| Protein GI | 152999645 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000240039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAATA CATTAGAGCA ACTCAAGTTA TATACCACTA TCGTCGCTGA CACAGGCGAC
ATCGAAGCGA TTAAACGCTA CCAACCTGAA GATGCGACAA CCAATCCATC GCTCATCTTG
AAAGCGGCTC AAATTCCTGA ATACGAATCC CTCATTGATA ACGCTATCGA CTGGGCAAAA
TCACAAAGTG ACGATCTCGC GCAGCAACTT GATGATGCCA GCGACAAGCT CGCCGTTAAT
ATCGGTGTAG AAATACTGAA ACTCGTTCCT GGTCGTATCT CTACTGAAGT CGATGCCCGT
TTATCATTCG ATAAAGAACA ATCCATCGCT AAGGCCCATA AGCTGGTTCG CCTCTACAAA
GAAGCGGGCG TTGATAAATC ACGCATTCTG ATCAAACTCG CTTCAACTTG GGAAGGCATT
TGTGCCGCTA AAGAGCTGGA GAAAGAAGGC ATCAACTGTA ACTTAACCCT ACTATTTAGC
TTTGCCCAAG CACGTGCTTG TGCCGAAGCG GGTGCTTATC TGATTTCGCC TTTTGTTGGC
CGCATTCTTG ATTGGTACAA AAAAGATACG GGTAAAGACT ACGACGCAGT AAATGATCCA
GGTGTCGTTT CTGTTACCGA AATCTATAAT TATTACAAAC AGCATGGTTT CAATACTGTC
GTTATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AGCTAGCAGG TTGTGATCGT
CTCACGATTG GCCCTTCTCT ATTAGAAGAA CTGGCTAATT CGCAAGTAGA CATTACTCCT
AAACTGGTTG CAGCAACCAG CACTGTCGCA GCTGAAGCCC CATTGACAGA AGCGCAATTC
CGTTGGGACT TTAACCAAGA TCCAATGGCA GTAGATAAGC TTGCGGAAGG TATTCGAAAC
TTTGCCATAG ACCAAGGCAA ACTCGAAGTG ATGCTCACGG CTAAGCTCGC AAACTAA
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| Protein sequence | MANTLEQLKL YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYES LIDNAIDWAK
SQSDDLAQQL DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEQSIA KAHKLVRLYK
EAGVDKSRIL IKLASTWEGI CAAKELEKEG INCNLTLLFS FAQARACAEA GAYLISPFVG
RILDWYKKDT GKDYDAVNDP GVVSVTEIYN YYKQHGFNTV VMGASFRNIG EIIELAGCDR
LTIGPSLLEE LANSQVDITP KLVAATSTVA AEAPLTEAQF RWDFNQDPMA VDKLAEGIRN
FAIDQGKLEV MLTAKLAN
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