Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1092 |
Symbol | |
ID | 5369976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1297361 |
End bp | 1299184 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829291 |
Product | oxaloacetate decarboxylase |
Protein accession | YP_001365307 |
Protein GI | 152999626 |
COG category | [C] Energy production and conversion |
COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTTG TATCTAATTC TACGACGGCA GTGGCTAAGC CATTATTTTT AACTGATGTC GTTTTGCGGG ACGCGCATCA ATCCATTTTA GCGACGCGCT TACGCATTGA TGACATGTTA CCGATAGCGC CATTACTCGA TAAGATCGGC TTCTGGTCAC TGGAATCTTG GGGTGGTGCA ACTTTTGATG CCTGTATTCG TTATCTTGGT GAAGATCCTT GGGATCGAAT TCGTGAGCTC AAAAAGGCCA TGCCGAATAC GCCGCAGCAA ATGTTGCTGC GTGGCCAAAA CCTCTTAGGT TATCGCCATT ATGCCGATGA TTTAGTCACG CGTTTTGTTG AGCGCGCCCA TACCAATGGC GTCGATGTAT TTCGTATTTT CGATGCGATG AACGATGTTC GAAACCTCGA GACTGCGGTG AAAGCAGTGC GTCAAGTTGG CGGCCATGCG CAGGGGACGA TTTCGTATAC CACGAGTCCA GTGCATACCA TAGAGACGTG GGTTGATATG GCAAAACGTC TCGAAGATAT GGGTTGTGAT TCTTTGTGTA TCAAAGATAT GGCGGGCTTA CTTAAGCCGA TGGAAGCGTT TGAGCTCATT AGCCGACTCA AATCTCAGAC CCAACTCGTG TTATCTATGC ATTGTCATGC GACGACAGGG TTGAGTACGG CCACTTATCA GAAAGCCATT GAAGCGGGTG TCGATGTGCT CGATACGGCA ATTTCGTCGA TGAGTCAAAC CTATGGACAT ACTGCAACTG AAACCGTTAT CGCTATGGTG GAAGATACTG AGCGTGCAAC GGGTTACGAT ATGGTGTTGC TTGAGGAGAT TGCCGCTTAT TTCCGTGAAG TGCGCAAGAA GTACGCTAAG TTTGAAGGCG CGCTGAAAGG CATAGATTCG CGTATCTTAC GTGCACAAGT GCCTGGTGGC ATGCTGACCA ATATGGAGAG CCAACTAAAG GAACAGGGCG CGGCCGATAA GATGGACTTG GTATTGGAAG AAATTCCCCG CGTACGTGCT GACTTAGGTT TCTTGCCGTT AGTGACGCCC ACATCGCAGA TTGTCGGCTC GCAGGCGGTC ATTAATGTGC TAATGGGTGA GCGTTACAAG TCACTGACCA AAGAGACTGA AGGCGTGCTT AAGGGCGAAT ATGGCGCGAC GCCTGCGCCA GTAGATGCCG CATTGCAAGC CAGAGTCTTG CAAGGGGCTG AAGCTATTAA ATGTCGCTCT GCGGATTTAT TAACGCCAGA GCTGGCTAAG TTACGGCTTG AGTTAGCTGA TAAAGCACAG GAACAAGGCA TTCGCCTATC TTCAGAGCAT GACGATGATG TGCTGACCTA TGCACTCTTC CCACAAATAG GATTGCAGTT CTTAAAGAAT CGTGACGATC CAAGCGCCTT TGAGCCTAAA CCTGAATTGA CTTCAGCACT TGCTACTAAT GCTGCGGATC GTGGCCCTGA AACCTACACG GTAACAGTCG AAGGGCAAGA GTACGTAGTT GAAGTCGCCG CAGGCGGGGA GATCTCGCAA ATCCAGCCAC AGGGCCAAAG TGTTTATGCC GTGCAAACTG CTACGGCGAG CACTACGCCA ACGGCGAACC ATGGTGAGAT CCGCCTCGAA ATGAGCGCGC CGCTGTCGGG CAACATCTTC AAAGTACATG TTTCTCCAGG CGATAGAGTG TGTGAAGGCG ATGTCGTGAT CATCCTTGAG GCGATGAAGA TGGAAACTGA AATTCGTGCT CAGGGCGATG GCATTATCGC TAAGCTCTGG GTGAAAGAAG GTGACTCAGT GTCTGTGGGT TCTCAATTAC TGGCCTTGGC GTAG
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Protein sequence | MTFVSNSTTA VAKPLFLTDV VLRDAHQSIL ATRLRIDDML PIAPLLDKIG FWSLESWGGA TFDACIRYLG EDPWDRIREL KKAMPNTPQQ MLLRGQNLLG YRHYADDLVT RFVERAHTNG VDVFRIFDAM NDVRNLETAV KAVRQVGGHA QGTISYTTSP VHTIETWVDM AKRLEDMGCD SLCIKDMAGL LKPMEAFELI SRLKSQTQLV LSMHCHATTG LSTATYQKAI EAGVDVLDTA ISSMSQTYGH TATETVIAMV EDTERATGYD MVLLEEIAAY FREVRKKYAK FEGALKGIDS RILRAQVPGG MLTNMESQLK EQGAADKMDL VLEEIPRVRA DLGFLPLVTP TSQIVGSQAV INVLMGERYK SLTKETEGVL KGEYGATPAP VDAALQARVL QGAEAIKCRS ADLLTPELAK LRLELADKAQ EQGIRLSSEH DDDVLTYALF PQIGLQFLKN RDDPSAFEPK PELTSALATN AADRGPETYT VTVEGQEYVV EVAAGGEISQ IQPQGQSVYA VQTATASTTP TANHGEIRLE MSAPLSGNIF KVHVSPGDRV CEGDVVIILE AMKMETEIRA QGDGIIAKLW VKEGDSVSVG SQLLALA
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