Gene Shel_25740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25740 
Symbol 
ID8396462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2847008 
End bp2847571 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content64% 
IMG OID644987319 
Productconserved protein of DIM6/NTAB family 
Protein accessionYP_003144930 
Protein GI257065258 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA AGAATCTGGG CAGCGCAGGC GAACTGTTCC CGCAGTCGGT GTTCATCATC 
GCGAGCTACG ACGAGAACGG CGTGCCGAAC GCCATGAACG CGGCGTGGGC GGGCGAGTGC
AGCCGCCACG AGATCTGCTT CAACATCGGC GACCACAAGA CCACGGCCAA CATCGTGAAG
AAGGGCGCGT TCACCGTATC GCCGGCAGAC GCGGCGCACG TGGTTGAGGC CGACTACTTC
GGCATCGCCA CGGGCAACAA GGTTGACAAG GCCGCCGCAT CCGGCATGAC CTTCACGAAG
TCCGAGTTCG TGGACGCGCC GGTCATCGAG GAGTTCCCGC TGACCATGGA GTGCGAGGTC
ACGGACGTCC AGGGCGACGA GCACGGCGCG CGCATCGTGG GCCGCATCGT GAACACCCGT
GTGGACGAGT CGGTGCTTGA CGAGAAGGGC CGCGTGGACT TCGACAAGAT GCGCCCGATC
GTCTACGACA GCACGCGCCG CATCTACCGC GTGGTGGGCG AAGAGGTCGG CGGTGCCTGG
GACGCCGGCA TGAAACTGAT GTAA
 
Protein sequence
MAFKNLGSAG ELFPQSVFII ASYDENGVPN AMNAAWAGEC SRHEICFNIG DHKTTANIVK 
KGAFTVSPAD AAHVVEADYF GIATGNKVDK AAASGMTFTK SEFVDAPVIE EFPLTMECEV
TDVQGDEHGA RIVGRIVNTR VDESVLDEKG RVDFDKMRPI VYDSTRRIYR VVGEEVGGAW
DAGMKLM