Gene Shel_19760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19760 
Symbol 
ID8395865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2208369 
End bp2208587 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content50% 
IMG OID644986727 
Producttranslation initiation factor 1 
Protein accessionYP_003144339 
Protein GI257064667 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00431201 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAAGG AAGATGTAAT CGAGCTTGAG GGCACCGTGC TTGAGGCGCT CCCGAACGCA 
ATGTTTAACG TCGAACTCGA GAATGGTCAT AAGATTCTCG CCCATATCTC GGGCAAGATG
CGCATGCATT ACATCAAGAT CCTTCCTGGC GACAAGGTTA CGGTGGAGCT TTCCGTCTAT
GACCTGAGCC GTGGCAGGAT TACATATCGC TTTAAATAG
 
Protein sequence
MAKEDVIELE GTVLEALPNA MFNVELENGH KILAHISGKM RMHYIKILPG DKVTVELSVY 
DLSRGRITYR FK