| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_16050 |
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| Symbol | |
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| ID | 8395495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1802865 |
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| End bp | 1803878 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644986359 |
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| Product | aspartate semialdehyde dehydrogenase |
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| Protein accession | YP_003143973 |
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| Protein GI | 257064301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000391441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000305241 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAAGT ACAACGTTGC AATCCTCGGC GCCACCGGCG TGGTCGGCCA GCAGATGCTG
AAGTGCCTGG ACGAACAGGA TTTTCCGGTA GGAAACATCA AGCTTCTTGC CAGCGCCCGC
AGCGCCGGCA AGACCGTTAA GTTCCAGGAC ACGGACATCG CCATCGAGGA GGCCCGTGAC
GAGGCCTTCG ATGGCGTGGA CATCGTGCTG GGCGCCGCCG AGAACGACAT CGCGCAGCGT
TTCATCCCCG TGGCCCGCGA GAAGGGCTGC GTGACGGTGG ACAATTCCAG CGCCTACCGC
CTGGACCCCG ATGTGCCGCT GGTGGTTCCC GAGATCAACC CCGAGGATAT CGCCAAGCAC
AAGGGCATCA TCGCCAACCC CAACTGCGCG ACCATCATCG GCCTGGTGCC GGTGTTCCCG
CTGCATAAGG CCGCAGGCGT CAAGCGCATC ATCGCCTCCA CCTATCAGGC TGCCTCCGGC
GCCGGCATCA ACGGTCTGCG CGAGCTTGAG GACCAGATAG GCCGCTTCGG CCGCGGCGAG
GAGATGTCCG ACCCCAAGGC CTTCGCCTAC CAGCTGGCCT TCAACCTGAT TCCGCAGATC
GGCGGCTTCG ACGAGAATGG CTACACTTCC GAAGAGATGA AGATGCAGAA CGAGGGCCGC
AAGATCATGC ACGTCCCCGA GCTGCGCGTG AACTGCACCT GCATTCGCGT TCCGGTCATG
CGCTCCCACT CCGAGAGCAT CACCATCGAG CTCGAGAATA AGCTGACTCC CGACGAGGCC
CGCGCCATTC TGGCCACCGC GCCTGGCGTC AAGCTGGTCG ACGACCCGGC TGCCCAGCAG
TATCCCATGC CGCTGGACAC CACCGACCAG GACCTCATCT TCGTCGGCCG CATCCGCGAG
GACATCTCCG CAGCCGATGG CACCTACGGA CTGACGCTGT GGTGCGCAGG CGACCAGATC
CGCAAGGGCG CCGCGACCAA CGCCGTCCAG ATTGCGAAGC TGCTCACCGT GTAG
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| Protein sequence | MRKYNVAILG ATGVVGQQML KCLDEQDFPV GNIKLLASAR SAGKTVKFQD TDIAIEEARD
EAFDGVDIVL GAAENDIAQR FIPVAREKGC VTVDNSSAYR LDPDVPLVVP EINPEDIAKH
KGIIANPNCA TIIGLVPVFP LHKAAGVKRI IASTYQAASG AGINGLRELE DQIGRFGRGE
EMSDPKAFAY QLAFNLIPQI GGFDENGYTS EEMKMQNEGR KIMHVPELRV NCTCIRVPVM
RSHSESITIE LENKLTPDEA RAILATAPGV KLVDDPAAQQ YPMPLDTTDQ DLIFVGRIRE
DISAADGTYG LTLWCAGDQI RKGAATNAVQ IAKLLTV
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