| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14900 |
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| Symbol | |
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| ID | 8395380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1713290 |
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| End bp | 1714015 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986244 |
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| Product | hypothetical protein |
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| Protein accession | YP_003143859 |
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| Protein GI | 257064187 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3382] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000192579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAAGT TCATCGCCGA AGAGTCGTTC TGGAACCTGT TCCCGGGTGC GTCCATCGGC
ATCGTCGTCG CTCGCAACAT GAAGAAGACC GAGGACGTGC CTGAAGAGGA CATCAACGCC
ATCGCGCAGA TTCTCAACGA CGCCAACAGC GCCGCCGACC AGCACCTGAC CAGCAACACC
ATCTCGCAGA ACGAAGTGGT TGCGGTATGG CGTGCTGCCT ATCAGAAGTT TAAGACCAAG
AAAGGCGCCC GCTGTTCGGT CGAGAACCTG CTCAAGCGCG TCCTGAAGGG CAATCCGGTT
GGTCACATCA CGCCGTCTGT CGACATCTAC AACGCCATCT CCCTGAAATA CGCCCTGCCC
GTGGGCGGCG AGGATATCGA CGCGTTCGTG GGCGATGTTC GCCTGGGGCT TACCGACGGC
GGTCTTGCGT TCCGTCCGCT AGGCGAGGAC GAAGACGACC CCACGCTGCC TGGCGAGATC
TGCTACCACG ACGACGAGGG CGCCATCTGC CGCTGCCTGA ACTGGCGCGA CGGCGTGCGC
ACGGCGCTGT CCGACGATTC CCAGAACGCG TTTTTGGTCA TCGAGTGCGT CGATGAGAAC
CGCGTTGGCG ACCTCCGTGC CGCCGTGGAC GAGTTCGCCC AGCTTATGGA GCGTTATCTG
GGTGCCACCA TCGAGGCCAA AGAGATCATC ACCCGCGAAA ACCCTGAAAT GGTCATCGTC
GCGTAA
|
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| Protein sequence | MQKFIAEESF WNLFPGASIG IVVARNMKKT EDVPEEDINA IAQILNDANS AADQHLTSNT
ISQNEVVAVW RAAYQKFKTK KGARCSVENL LKRVLKGNPV GHITPSVDIY NAISLKYALP
VGGEDIDAFV GDVRLGLTDG GLAFRPLGED EDDPTLPGEI CYHDDEGAIC RCLNWRDGVR
TALSDDSQNA FLVIECVDEN RVGDLRAAVD EFAQLMERYL GATIEAKEII TRENPEMVIV
A
|
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