Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14640 |
Symbol | |
ID | 8395354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1680715 |
End bp | 1682328 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644986218 |
Product | glycosyl/glycerophosphate transferase, teichoic acid biosynthesis |
Protein accession | YP_003143833 |
Protein GI | 257064161 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00366623 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000565277 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACTCG CACGGTATTG GTGGGAACGC ACCATCCTGT TCCTCGAAGT TGACCCCGCC ACGCCCTTTG CGGCCGATGA GAAACTGTAT CTGCAGCTCA TTCCTGCAGA CGATTCCGAA GCACCCGAAC CTTTCGCGGT TGATAACTGC GCACGGATCT CCGACACGGT CATGTCCGTG CGCTTCCTCA TGGGCGTCGC GAACGACCCG GTGCCTGCAG GCACCTACCG TGCCCTTGTG CAGCGCGACG GAGCATTCAC GCCCGTCGAC GTTTCCGAAA TAGGCATTCC GCTGCTTTCG CTGGACAACA AGCGCTCAGA CGTGTTCCTG TACATTCGTG CCGAATGCTA CTATGCAGCC GTCCCCGTCG ATCGCGACGG AGAGCTCGCT TTCAAGGTCA CGAGCAAAGC CGCCCCGGGC CACAAGCCTT CGGCCCATTA CAGCAACAAG GCCGAAATCG CCGAGAACCA TCGGCTCCTG ATCCACAACT ACAAAGCAGG GCTGCTCATC TCGTTCTTCA ACTTCTTCAA GAAGACATGC AGGGTCAACC CCAAAAAGAT CCTATTCACT TCAGACAGCC GGGCCAACCT GTCCGGCAAC ATGGAGCCAC TGTATAAGCG CATGCAGGAA CGCGGCATTA CCGACAACTA CAAGGTCGTG TTCTCGTTTA AAGAGGATGC CGTGCATCGC CGCAGTTTGT GGTCGCTCAT CAACCTGCAT TACCATCTGG CCACGTCGAA GCTCATTTTC TGCGACGACT ACCAGTCGAT GCTGTACCGC CTGAACTATA GGCCCGAACA GCGTCAGATC CAGCTTTGGC ACGCATGCGG CCATTTCAAG ACGGTCGGAT TGGGGCGCAT CGGCACGCTT GCAGCCGTCT CGCCTTTCAA CATCAGCCAT CGCACCTACA CCGACGTCAT TGTGGCATCT GACAGCGACG TGCCCATCTA CGGTGAAGCC TTCGGCATCC CCGACAACCG CGTGAAGCCC TTAGGCATCC CCCGCCACGA CTGGCTGCTG GACAAGGATT GGCAGGCCGA AAAGAAGAAG ACCTTCCAGG AGACCTTCCC CAACGCCGAC GGCAAACGCG TGGTGGTGTT CGCCCCGACG TTCCGTGGCG AAGGCCGTCG CACCGCCTAC TACGATTACG ACCTGCTGCA GCCCGAACGG CTGGCGCAGT TCTGCCGCGA GCACAACCTG TTCTTCATTT TCAAGATGCA CCCTTTCGTG CTGCAGGAGC CGCCCATCCC CGCGGGCTGC GACGATGTGT TCGCCAACGG AACGCCAATT CGCGAGATCA ACGACATTCT GCCCAGCACC GACATCCTGA TCACGGATTA CTCCTCTGTC GTTTATGAAG CGTCGCTTTT GGGCATCCCC ACGCTCTATT ACGCCTTCGA CAAGGAGGAA TACATCAGCG AGCGCGACTT CTACGAGTCC TACGACGATT TCGTCAGCGG CAAGATCGTC TACACCTTCG ACGAGCTGCT CGACGCCATC GCCAACGAGG ACTTCGAGCT GGAAAGGCTC CAGGATTTCG TCCGCAAGAA CTTCAAGCAC ATCGACGGTC ACGCCTGCGA CCGCATCATC GACGAAACCA TCCTGAAGGC CTAG
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Protein sequence | MKLARYWWER TILFLEVDPA TPFAADEKLY LQLIPADDSE APEPFAVDNC ARISDTVMSV RFLMGVANDP VPAGTYRALV QRDGAFTPVD VSEIGIPLLS LDNKRSDVFL YIRAECYYAA VPVDRDGELA FKVTSKAAPG HKPSAHYSNK AEIAENHRLL IHNYKAGLLI SFFNFFKKTC RVNPKKILFT SDSRANLSGN MEPLYKRMQE RGITDNYKVV FSFKEDAVHR RSLWSLINLH YHLATSKLIF CDDYQSMLYR LNYRPEQRQI QLWHACGHFK TVGLGRIGTL AAVSPFNISH RTYTDVIVAS DSDVPIYGEA FGIPDNRVKP LGIPRHDWLL DKDWQAEKKK TFQETFPNAD GKRVVVFAPT FRGEGRRTAY YDYDLLQPER LAQFCREHNL FFIFKMHPFV LQEPPIPAGC DDVFANGTPI REINDILPST DILITDYSSV VYEASLLGIP TLYYAFDKEE YISERDFYES YDDFVSGKIV YTFDELLDAI ANEDFELERL QDFVRKNFKH IDGHACDRII DETILKA
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