| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11820 |
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| Symbol | |
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| ID | 8395073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1365410 |
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| End bp | 1366267 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985939 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_003143563 |
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| Protein GI | 257063891 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00376566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGTTCG GACCGAAACG CGTGGTTTGG ATAGCGGGTG CAACGGGACG TCTTGGCCGG
TCCATCGAAT ACCATCTTGA CCATGACACT TACTCAATTC ACACGACGGA CAGGGAGCTG
AACGTCACCA ACCTTGACAT GGTCACCACG TTCGCAGAAT CATACCGACC CGAATTCATC
ATCAACTGCG CCGGCATCGC CGACAAGGAC GTCTGCGCGG CCAACCCCGA CGAAGCCTAT
CGGGTAAACG CATTGGGCGC GCGTAATCTG GCCGTGGCCA GCCATTACCT GGGGGCCACC
ATCATTCAGA TCTCCACGGA CGACGTGTTC CGCTCCACCA AGCCGAACTC AGCGCCGTTG
AGCGAATTCG AGCGCACCAA CCCCTCTTTC ACGTATGGAA AGTCCAAAGA GGCGGGCGAA
GTGCTCGTGC GCGAGCTTAA CCCGCGCCAT GTCATCCTGA GGTCGTCCTG GATTTACACC
GCCCGGAAGG ACGATTTTTT GCGCATGCAT ATCGCCGATG CCAAAGCCGG TAGGGAAATC
GAAGTACCGG CCGACCAGTT CGGCTCCCCC ACCAGCTCCG ATACCTTCTG CAAGGTGCTG
ATGTCCATCA TGGAGACCGG AGAGTACGGC ACCTTCCATC TGTCCTGCGA GGGGCTGTGC
AGCCGATACG AGTTCATCAA ACGCGCGCTG GAACTGGCAG GCGCCTCCAC CGTCAACATG
GTTGGCACCT ACGATCCCGA CAAGGCTTTC CACGTGGAGC TGGACAACAT GATGATCCGT
CTGACCGGCC TTGCGAAGAT GCCTTCTTGG AAAGACGACC TGGAAGAATA TATGCGCAAC
CACAGACTCT TAGGTTAG
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| Protein sequence | MTFGPKRVVW IAGATGRLGR SIEYHLDHDT YSIHTTDREL NVTNLDMVTT FAESYRPEFI
INCAGIADKD VCAANPDEAY RVNALGARNL AVASHYLGAT IIQISTDDVF RSTKPNSAPL
SEFERTNPSF TYGKSKEAGE VLVRELNPRH VILRSSWIYT ARKDDFLRMH IADAKAGREI
EVPADQFGSP TSSDTFCKVL MSIMETGEYG TFHLSCEGLC SRYEFIKRAL ELAGASTVNM
VGTYDPDKAF HVELDNMMIR LTGLAKMPSW KDDLEEYMRN HRLLG
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