Gene Shel_08220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_08220 
Symbol 
ID8394713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp953833 
End bp954153 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content63% 
IMG OID644985582 
Producthypothetical protein 
Protein accessionYP_003143227 
Protein GI257063555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00422276 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00352064 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGCTA TCAACGGGCT TGAATGGATG GAGACTGGCG AGGCGCTAGA CCTCTTGCGC 
GTGAGTTCGG ACAACCTGCC GCTCATCGAG CAGCTAGCCG CCTCCGTCCC GTCCTACGTA
GAGGTAATGA CGGGCTATCC GGCGGAATAC ACGGCGGGCG ACGATTGTCA CGAGCTGGTC
AAGCAGCTCT CGCGCTTCGT GCTGCAACTG TGGTTCAACC CTGACGGCAC CGACTCGCAG
GCGTTGAGCC GCGTTGTCGG ATCGCTGGCA AAGAGCGTCA AGGCGCTCGT GGGTGTCGGA
TACCTGCCCG CCAACGGCTA G
 
Protein sequence
MAAINGLEWM ETGEALDLLR VSSDNLPLIE QLAASVPSYV EVMTGYPAEY TAGDDCHELV 
KQLSRFVLQL WFNPDGTDSQ ALSRVVGSLA KSVKALVGVG YLPANG