Gene Shel_03250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03250 
Symbol 
ID8394217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp393966 
End bp394826 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID644985095 
Producttransposase 
Protein accessionYP_003142741 
Protein GI257063069 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00459877 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGGG AGCTTTCAGG GGAAGGGCAC AAGCTGGCTG ATCTCCTGGC CGCGTCCGGC 
GTGCCCGCAT CGACCTACCA CTACAACAAG GCCAAGGGGC CGAAGGCGCC GACCAGGCCG
GAGCTGTGGG AGGACGTTGC AGAGATCTTC TCGCGCACGG CCAACGGCTG CGGCCACAGG
CAGATCGCGA TGTGCCTGCG CGCCAAGAAG GGCGTCTGCA TAGCCGACAA GACCGCGCTC
AAGATCATGC ACGAGATGGG CGTCAGCTGC GGCATAAGGC GCGAGACAGA CTACCACAAG
TACAACTCCT ACAAGGGCGT CGTCGGCGAG ACGTTCGAGA ACCTGCTCGA CCGCGACTTC
TCCGCCGACG GGCCGTGGCA GAAGCTGGGG ACCGACGTCA CCGAGTTCAA GCAGGTTTGG
GGCAAGGGCT ACCTCGCGCC GGCCTACGAT TTCGGCAGCA AGGAGATCGT CGCCTGGTCG
ATATCGGAGC ATCCCGACAT GATGCAGCAG AAGGAGATGC TCGCGATGCT GCTGCCCAAG
GTGCCGGCGG GATCCAGCCC CATCATGCAA TCGGACATGG GCTGGCAATA CCAGCACGAG
TTCTACTGCA ATGCACTCAG GGAAGCCGGG ATAATCCAGA GCATGTCGCG CAAGGGAAAC
TGCATAGACA ACGGGGCGAC GGAACAGGTG TTCGGCCACA TCAAGGACGA GTTCTTCAGG
GGCCAGGAGT TCCCGGACTT CGAGACGTTT AAGGCCGAGC TGGAGGAGTA CATCATCCAC
TGGAACACGA AGAGGAGACA GGTTAAACTC AAGGGACTGA CCCCGGAAGA ATTCCGGAAT
CAGTCCCTTC GTGTGGCGTA G
 
Protein sequence
MIRELSGEGH KLADLLAASG VPASTYHYNK AKGPKAPTRP ELWEDVAEIF SRTANGCGHR 
QIAMCLRAKK GVCIADKTAL KIMHEMGVSC GIRRETDYHK YNSYKGVVGE TFENLLDRDF
SADGPWQKLG TDVTEFKQVW GKGYLAPAYD FGSKEIVAWS ISEHPDMMQQ KEMLAMLLPK
VPAGSSPIMQ SDMGWQYQHE FYCNALREAG IIQSMSRKGN CIDNGATEQV FGHIKDEFFR
GQEFPDFETF KAELEEYIIH WNTKRRQVKL KGLTPEEFRN QSLRVA