Gene Shel_02900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02900 
Symbol 
ID8394182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp348708 
End bp349598 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content49% 
IMG OID644985061 
Producthypothetical protein 
Protein accessionYP_003142707 
Protein GI257063035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00646507 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTACCT ATCCAATAGC TAAACAATTC GAAAGATTCT GCGGAAACCT AGCGATTTCA 
TGCGATACGC TAGCTGTGAT TTCATACCGT TACCACTCGA TAACGAAACG CCTCAATGCA
GATTTCTGGG ACTCTAGTTC AGACGAAGCT CATGGTCGAT ATGTGGGGTC TTATGGTCGT
GGAACACGTA TCGACGGCAG CGACGTCGAT ATTCTCTTCC GATTTCCTTA CAACATGTAT
GTCAAATACG ATGCATACGC ATCAAACGGA CAAAGCGCGC TGCTCCAAGC TGCAAAGATG
TCGATAGCGA CCACCTATCC CTCAACGCGT CTTAAGGGCG ATGGGCAAAT CGTTGCCGTG
GATTTTTCGG ACGGGATCAA TTTCGAGGTC CTTCCTGCCT TCGAGTGTGA AGACGGAAGC
TATCTCTTTC CTGACTCCAA CGGAGGCGGC AGATGGAGAG CATGCGACCC CGTTGCAGAA
ATCAACGAGC TGAACTCTAT GGACGAAGCA TGCAATGGCA ACCTTAAGAG GCTATGCAAA
ATGGCAAGGG CGTGGCGAGA AGCTAATTCC GTATCAATCA GCGGCATTGC GATTGACGTG
TTCGCTTACA ACTTCATGAA GCATTACAGC CACCGTGATG ACGGATACAT ATTCTACGAC
CGGCTAACTA GAGACTTCTT CGCATATGTG GCTAATTTAG ATGCGACGCA ATCGACATGG
AAGGTCTTCG GAAGCGGTCG ATACGTTACC ACCTCAGGGT ATTTCCGCAA CAAAGCGGCT
GCCGCGCGAA ACAAGGCGAT CGAAGCAATC AAAGACCAGG ATAATGGCTA TATGCATGCG
ACAAATGACG CATGGAAGGA AATCTATGGC TCACGATTCC CAAGACTATA G
 
Protein sequence
MATYPIAKQF ERFCGNLAIS CDTLAVISYR YHSITKRLNA DFWDSSSDEA HGRYVGSYGR 
GTRIDGSDVD ILFRFPYNMY VKYDAYASNG QSALLQAAKM SIATTYPSTR LKGDGQIVAV
DFSDGINFEV LPAFECEDGS YLFPDSNGGG RWRACDPVAE INELNSMDEA CNGNLKRLCK
MARAWREANS VSISGIAIDV FAYNFMKHYS HRDDGYIFYD RLTRDFFAYV ANLDATQSTW
KVFGSGRYVT TSGYFRNKAA AARNKAIEAI KDQDNGYMHA TNDAWKEIYG SRFPRL