Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_02900 |
Symbol | |
ID | 8394182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 348708 |
End bp | 349598 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644985061 |
Product | hypothetical protein |
Protein accession | YP_003142707 |
Protein GI | 257063035 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00646507 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTACCT ATCCAATAGC TAAACAATTC GAAAGATTCT GCGGAAACCT AGCGATTTCA TGCGATACGC TAGCTGTGAT TTCATACCGT TACCACTCGA TAACGAAACG CCTCAATGCA GATTTCTGGG ACTCTAGTTC AGACGAAGCT CATGGTCGAT ATGTGGGGTC TTATGGTCGT GGAACACGTA TCGACGGCAG CGACGTCGAT ATTCTCTTCC GATTTCCTTA CAACATGTAT GTCAAATACG ATGCATACGC ATCAAACGGA CAAAGCGCGC TGCTCCAAGC TGCAAAGATG TCGATAGCGA CCACCTATCC CTCAACGCGT CTTAAGGGCG ATGGGCAAAT CGTTGCCGTG GATTTTTCGG ACGGGATCAA TTTCGAGGTC CTTCCTGCCT TCGAGTGTGA AGACGGAAGC TATCTCTTTC CTGACTCCAA CGGAGGCGGC AGATGGAGAG CATGCGACCC CGTTGCAGAA ATCAACGAGC TGAACTCTAT GGACGAAGCA TGCAATGGCA ACCTTAAGAG GCTATGCAAA ATGGCAAGGG CGTGGCGAGA AGCTAATTCC GTATCAATCA GCGGCATTGC GATTGACGTG TTCGCTTACA ACTTCATGAA GCATTACAGC CACCGTGATG ACGGATACAT ATTCTACGAC CGGCTAACTA GAGACTTCTT CGCATATGTG GCTAATTTAG ATGCGACGCA ATCGACATGG AAGGTCTTCG GAAGCGGTCG ATACGTTACC ACCTCAGGGT ATTTCCGCAA CAAAGCGGCT GCCGCGCGAA ACAAGGCGAT CGAAGCAATC AAAGACCAGG ATAATGGCTA TATGCATGCG ACAAATGACG CATGGAAGGA AATCTATGGC TCACGATTCC CAAGACTATA G
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Protein sequence | MATYPIAKQF ERFCGNLAIS CDTLAVISYR YHSITKRLNA DFWDSSSDEA HGRYVGSYGR GTRIDGSDVD ILFRFPYNMY VKYDAYASNG QSALLQAAKM SIATTYPSTR LKGDGQIVAV DFSDGINFEV LPAFECEDGS YLFPDSNGGG RWRACDPVAE INELNSMDEA CNGNLKRLCK MARAWREANS VSISGIAIDV FAYNFMKHYS HRDDGYIFYD RLTRDFFAYV ANLDATQSTW KVFGSGRYVT TSGYFRNKAA AARNKAIEAI KDQDNGYMHA TNDAWKEIYG SRFPRL
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