Gene Sfum_3701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3701 
Symbol 
ID4457988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4516830 
End bp4517669 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID639704474 
Productmethyltransferase type 12 
Protein accessionYP_847806 
Protein GI116751119 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTC TTTCGGAGAT CGACTGGAAC GAGCTGTGGA AAGAGGCGCA AGCCAGAAAA 
CACACGCCTC ACCACGATTC CGAGTTCTGG AACAAAAGGG CGCCGTCCTT TGCCAAACAT
GCATCCAGCA GCGGTTACGT CGAACAGTTC ATGGCCATCC TCAAACCCGA GCCGCACTGG
AGCGTACTGG ACATAGGTTG CGCGGCGGGC ACGCTTGCCT TGCCGCTTGC GTCGATCGTC
AGGTCGGTAA CGGCCCTCGA TCCCTCGACG ACCATGCTTT CCCTGCTCGA AAACCGCTGC
AGGGAACAAC GCATCACCAA TATTCGGATC GTCGAGGGCT GCTGGGAGGA CGACTGGGAT
GATCTCGGCA TCGGCGTCCA CGATGTCGCC ATCGCGTCGC GCTCGCTCAT CGTGGAAGAC
CTGAGAGCCG CCGTTTCGAA GCTCGAAAGC CGCGCGAGGA AACGGGTATA TCTTTCGACC
CTGGTGGACA GCGGTCCATA CGACCACCGG ATCGTGGAAG CCGTGGGCCG CAGTTTCGAT
CACGGCGCCG ATTACATCCT CGTCTACAAC CTCCTGAGGC AGATGGGGAT CTATGCGAAC
GTCTCTTTTA CCCTCAGCCG TGACGACAAG ACCTTCCGGG ACCTCGAGGA TGCCCTCGAT
TCGGTGCGCT GGATGATCTA CGAAATGACC TCGACCGAGG AGAAAAGGCT CCGCCGCTAT
CTCGGGCACC ACCTCATCCG GGAGAACGGC CGCTGGAAGC TGCCGTACCG GCGGGTTGTC
CGTTGGGCGG TGCTGTGGTG GGACAAGGAA GGGACCATAC CCGGAGAGTG GTGCGCATGA
 
Protein sequence
MMRLSEIDWN ELWKEAQARK HTPHHDSEFW NKRAPSFAKH ASSSGYVEQF MAILKPEPHW 
SVLDIGCAAG TLALPLASIV RSVTALDPST TMLSLLENRC REQRITNIRI VEGCWEDDWD
DLGIGVHDVA IASRSLIVED LRAAVSKLES RARKRVYLST LVDSGPYDHR IVEAVGRSFD
HGADYILVYN LLRQMGIYAN VSFTLSRDDK TFRDLEDALD SVRWMIYEMT STEEKRLRRY
LGHHLIRENG RWKLPYRRVV RWAVLWWDKE GTIPGEWCA