Gene Sfum_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2602 
Symbol 
ID4459076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3215101 
End bp3216486 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content61% 
IMG OID639703373 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_846715 
Protein GI116750028 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID[TIGR01513] putative nicotinate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCT GGAACAGATA CGCTCCCGAA TTGGTCACCG ATCTCTACGA GCTCACCATG 
GCCGCGAGCT ACTACCGGGA AAGCATGTTC GGAGAGGCGA CGTTCAGCCT GTTCGTCAGG
GACTACCCGT CTCACCGGGC GTATTTTATC GCGGCCGGGA TCGAACACCT GCTCGAATCG
GTGGCTCAAT TCCGGTTCAG CGAGTCCTCC CTGGAATACA TTGCCTCCAC GGGGAAATTC
GCCTCCGATT TCATCGATTA CCTCGGGCGG TTCCGTTTTA CGGGCTCGAT CCGCGCCCTT
TCGGAGGGGC GTATCTTCTT TTGCAATGAA CCGATCCTGG AGGTGACCGC CCCGATCATC
GAGGGACAGA TCATCGAGAC GCTGGTGCTC AACGTCATCC AACTGGAGAC CATGATCGCC
GGTAAGGCCG CGCGTTGCGT CCACGCCGCG GGAGGAAGAG GTCTGATCGA TTTTTCCCTG
CGCCGTACGC AGGGCGTGGA TGCCGGCGTG AAAGCCGCCC GGGCGAGCTA CCTGGTCGGT
TTCGAGGGAA CGAGCAATCT GCTGGCCGGG CAGATCTACG GGATTCCGGT GTTCGGGACG
ATGGCGCATT CCTACGTCAC GAGCTTTCAC AGCGAAATGG ATTCCTTCCT GGCCTTTGCC
CGGGCTTTTC CGGACAACAC CGTGCTGCTC ATCGATACCT ACGACACGCT GAGCGGGGCG
GCGAAAGCGG TCGAGATCGC GCGCATGCTG CGGGCGCAGG GCCGGGAGCT CAAGGGCGTG
AGGCTGGACA GCGGAGACCT CGTGAGCTTG AGCAAAGGCG TCAGGAAGAT CCTTGACGAG
GCCGGCTTTC CGGATGTGAA GATCATGGCC AGCGGCAGCC TCGACGAGTA CGGGCTCAAG
GAACTGCTCG ATGCGGGGGC GCAGATCGAC ACGTTCGCCG TGGGGACCAA GATGGGCGTC
TCCGCCGACT CCCCGTACCT CGACATCGCC TACAAACTGG TCGAATACGA CCACCGACCG
GTGCTGAAGC TGAGCAGCGG GAAGAAAACC TGGGTGGGAA GAAAGCAGAT CTATCGCCGT
TATGACGACC GGGGCATGAT GTGCGAGGAT CTGCTGACCC TCGCGTCGGA CGATCGGGCA
ACCGGCGAGC CGCTCCTCGA GGTCCTGGTG GAAGATGGGC GACCCGCGCG GGCCCCGGAG
TCCGTCGAGA CGATCCGGTC CAGGTTCCGC CGGGAATGGG AAACGCTGCC GTTGCCTCTG
CGTGAAATCA TTCCGACGGA GCGCTATGTC GTCCGCATCA GTCCTGCATT GATGGCCATG
GACGAGCAGG TCACCGACCG GGTCATGATT GAAGAGGTGC GTCAGCCTTC CATACGCCAA
AGATAG
 
Protein sequence
MNLWNRYAPE LVTDLYELTM AASYYRESMF GEATFSLFVR DYPSHRAYFI AAGIEHLLES 
VAQFRFSESS LEYIASTGKF ASDFIDYLGR FRFTGSIRAL SEGRIFFCNE PILEVTAPII
EGQIIETLVL NVIQLETMIA GKAARCVHAA GGRGLIDFSL RRTQGVDAGV KAARASYLVG
FEGTSNLLAG QIYGIPVFGT MAHSYVTSFH SEMDSFLAFA RAFPDNTVLL IDTYDTLSGA
AKAVEIARML RAQGRELKGV RLDSGDLVSL SKGVRKILDE AGFPDVKIMA SGSLDEYGLK
ELLDAGAQID TFAVGTKMGV SADSPYLDIA YKLVEYDHRP VLKLSSGKKT WVGRKQIYRR
YDDRGMMCED LLTLASDDRA TGEPLLEVLV EDGRPARAPE SVETIRSRFR REWETLPLPL
REIIPTERYV VRISPALMAM DEQVTDRVMI EEVRQPSIRQ R