| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1933 |
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| Symbol | |
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| ID | 4459770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2357259 |
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| End bp | 2359484 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702700 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_846053 |
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| Protein GI | 116749366 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.820438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.142567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCA GTCAGGGACC ACCGGATAAA ACCAGCAGGC GCCGTACCCG GGAACGCATC
CTGGTGATTG CCGTGTTTGC GGCGATCATC ACGGTCGGAT TCTTCGAGGG CTGGTTTTTC
CGGCTGCAAT CGGACCTGCC CCTGTCCGGG AATATCCTGC TGTTCGCCTT CATCAACATC
AACGTCATCC TGCTTTTGCT GCTCGCGTAC CTGGTTTTGA GAAACATCGT CAAGCTGGTT
TTCGAACGCA AGCGCAATAT CCTCGGGCAC AAGTTGAGGA CCCGGCTGGT GATCGCATCC
GTGGGACTGA CGCTCATCCC CACGATACCG CTGTTCTGGC TGGCGACGCA GTTCATCTTC
TCCAGCCTTG ACCAATGGTT CAGCTACCAG GTGGAGCAGT CGCTCGAGCA GGCGGTGGGA
CTGGGAAAGA ACGTCCTGGA ACGGGAAGGA GCCGACCTGG TCACCGATGC CCGGTCGATC
AAAGCCGAGG TATTGAAGCT CGACGAAGAG GAAAGACCTG CGCCCGCGGC ACTGGAGCGC
ATCTCTTCCT CTTACATGGG ACAGTACCGC ATCGACGGGC TTTTTCTCTT CGACGGTTCC
GGCCGCCTGA CCTGGAAGAC GGTCTCCCCG GAGCTCGGCG AAATCGAACC CGGGGCCCTC
CGGAAACTGC TTGAAAAGGA ATCCGAACAG ACGGCCAGGA GCTACACCCT GAGCTCCGAG
GCAAAACGCG AGGGACTGGC CGCTCACGTG TTCTTCCCGC GCGGGAGCGG TCCCACCGGC
GAGGGGAGCG AGTTGATCGC GTTCCGGCTT CTTCCTCCCC ACATCATGGA AAAACTCGGC
ACCATCACCG GCGGCTACGA AGATTACCTG CAACTCAAGC TTCTGCACTT TCCTTTGAAG
CAGAGCCATT TCATCACTTT TTCCATCGTT ACGCTGCTCA CCATCTTCGC CGCCATCTGG
TTCGGTTTCT TCATTGCCAG GAGCCTCACC GTGCCCATCC AGGCCCTGGT TTCCGCCACT
CAACGCATCG CCGAAGGCGA CCTGGAGGTT CATCTCGAAT CCCAGCGCCA GGATGAGCTG
GGCATGCTGA TCACTTCCTT CAACGACATG GTGGAGGACC TGCGCGAGAG CCGGGGGAAG
CTGGCCAACG CTTATCTGGC CTTACAGCAA AGCCACCTGG AGCTGGAGAA CCGGCGGCGG
TACATGGAAG TCGTGCTGAA GAACATCGCC GCGGGCGTGG TCAGCGTGGA CGCCGGGGGA
CGGATCATGA CGATGAACAA GGCGGCCGAG GAAACGTTCG GGCTGCATGC GGACCGGGTG
AAAGGGCTGC ATTACTCAAG CTTCCTGCGG CCCGCGCACC TGGAGATCGT CAAGTCCTTC
ACGGAAATGT ACGAATCCAC CCGGCAGCCG TACCTGGAAC AGCAGGTCCA GGTCGTGGTG
GGCGAGCAGC CGATGACCCT GCTCATCAAC GCCTCGGTGC TCAAGGACGA GAAGAACGAG
TTCATGGGGG TGGTGGCCGT GCTGGACGAT CTGACCGAGC TGGAGAAAGC CCAGCGCATG
GCCGCCTGGC GGGAGGTGGC GCGGCGCATC GCCCACGAGA TCAAGAACCC GCTCACCCCC
ATTCAGCTGT CGGCCCAGCG GCTGCGCCGC AAGCACCCGG AGCTGCTCGA GGAGGCGGAC
TCGGTCTTCG ATGAATGCAC GCGCACCATC ATTCAACAGG TCGATCACAT GAAGCACCTG
GTCAACGAGT TTTCGAAGTT CGCGCGCCTG CCCCGCGCCC GCCCGGTGCC GAGCGATCTG
TGCGCCATCA TCGAGGAGAG CCTGGCCCTG TACCGTCATA CGTATCCGAA CATTTCCTTC
GTTCTCGAGA AGATGGACGA CCTCCCGCCG CTCAGGCTCG ATCGGGATCA ATTCCGACAG
GTTATGATCA ACCTCATCGA GAACGCCGTC TACGCGATCG GCAGGGAGAA GGGCGTCATC
ACCAACCGGG TCTCCTACGA CCCGGTCCTC AATATCGCGC GGATGGAATG CGCGGACACC
GGCCGCGGGA TATCGCCCGA AGGCAAGTTG CGCATGTTCG AACCGTACTA TTCCACGCGT
CGGAAGGGCA CCGGGCTGGG GCTGGCCATC GTCGCCAGCA TCATTGCCGA TCACAACGGG
TTCGTGAGGG TCCGGGACAA CGTGCCGGCC GGCACGGTGA TCGTCATAGA ACTGCCCGGG
CGATGA
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| Protein sequence | MNSSQGPPDK TSRRRTRERI LVIAVFAAII TVGFFEGWFF RLQSDLPLSG NILLFAFINI
NVILLLLLAY LVLRNIVKLV FERKRNILGH KLRTRLVIAS VGLTLIPTIP LFWLATQFIF
SSLDQWFSYQ VEQSLEQAVG LGKNVLEREG ADLVTDARSI KAEVLKLDEE ERPAPAALER
ISSSYMGQYR IDGLFLFDGS GRLTWKTVSP ELGEIEPGAL RKLLEKESEQ TARSYTLSSE
AKREGLAAHV FFPRGSGPTG EGSELIAFRL LPPHIMEKLG TITGGYEDYL QLKLLHFPLK
QSHFITFSIV TLLTIFAAIW FGFFIARSLT VPIQALVSAT QRIAEGDLEV HLESQRQDEL
GMLITSFNDM VEDLRESRGK LANAYLALQQ SHLELENRRR YMEVVLKNIA AGVVSVDAGG
RIMTMNKAAE ETFGLHADRV KGLHYSSFLR PAHLEIVKSF TEMYESTRQP YLEQQVQVVV
GEQPMTLLIN ASVLKDEKNE FMGVVAVLDD LTELEKAQRM AAWREVARRI AHEIKNPLTP
IQLSAQRLRR KHPELLEEAD SVFDECTRTI IQQVDHMKHL VNEFSKFARL PRARPVPSDL
CAIIEESLAL YRHTYPNISF VLEKMDDLPP LRLDRDQFRQ VMINLIENAV YAIGREKGVI
TNRVSYDPVL NIARMECADT GRGISPEGKL RMFEPYYSTR RKGTGLGLAI VASIIADHNG
FVRVRDNVPA GTVIVIELPG R
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